RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 SNRKQ9NRH2 765 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 BMP2KQ9NSY1 1161 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 USP16Q9Y5T5 823 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 VAMP4O75379 141 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 PROSER2Q86WR7 435 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 MYO1BO43795 1136 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 CAVIN2O95810 425 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 AK2P54819 239 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 DCTPP1Q9H773 170 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 DBF4Q9UBU7 674 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 MTIF2P46199 727 aaKnown RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 CEP85Q6P2H3 762 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 OTUD7AQ8TE49 926 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 CCDC114Q96M63 670 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 POLR3AO14802 1390 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 DTNBO60941 627 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 EVCP57679 992 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 GABPB1Q06547 395 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 CNKSR2Q8WXI2 1034 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 CEP63Q96MT8 703 aa11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 ORC3Q9UBD5 711 aaPredicted RBP11.18□□□□□ -0.62
CTDSPL2-201ENST00000260327 ANKRD36BQ8N2N9 1353 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 ANAPC15P60006 121 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 A0A087WZG4 1122 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 NAPBQ9H115 298 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 MACROD2A1Z1Q3 448 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 N4BP3O15049 544 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 DDX46Q7L014 1031 aaKnown RBP11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 ERO1AQ96HE7 468 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 CPA1P15085 419 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 SLC12A7Q9Y666 1083 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 ATP5J2-PTCD1G3V325 749 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 CCDC6Q16204 474 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 CCDC96Q2M329 555 aa11.17□□□□□ -0.62
CTDSPL2-201ENST00000260327 CTAGE9A4FU28 777 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 NOP2P46087 812 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 FBF1Q8TES7 1133 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 IFNKQ9P0W0 207 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 GOLGA8AA7E2F4 631 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 MICU3Q86XE3 530 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 PHACTR3Q96KR7 559 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 ZSCAN16Q9H4T2 348 aaPredicted RBP11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 IFIT3O14879 490 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 SYKP43405 635 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 FAM160A1Q05DH4 1040 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 CKAP4Q07065 602 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 SSRP1Q08945 709 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 ZNF569Q5MCW4 686 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 CCDC102BQ68D86 513 aa11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 UTP14AQ9BVJ6 771 aaKnown RBP11.16□□□□□ -0.62
CTDSPL2-201ENST00000260327 OPA1O60313 960 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 PPARDQ03181 441 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 CCDC160A6NGH7 325 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 ZBTB7BO15156 539 aaPredicted RBP11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 PPP2R3AQ06190 1150 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 ATP8B2P98198 1209 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 Q6ZUG5 572 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 ZMYM4Q5VZL5 1548 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 CHPF2Q9P2E5 772 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 UBA5Q9GZZ9 404 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 BICRAQ9NZM4 1560 aa11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 PA2G4Q9UQ80 394 aaKnown RBP11.15□□□□□ -0.62
CTDSPL2-201ENST00000260327 PIK3R4Q99570 1358 aa11.15□□□□□ -0.63
CTDSPL2-201ENST00000260327 HDXQ7Z353 690 aa11.15□□□□□ -0.63
CTDSPL2-201ENST00000260327 UBE3BQ7Z3V4 1068 aa11.15□□□□□ -0.63
CTDSPL2-201ENST00000260327 THEMISQ8N1K5 641 aaPredicted RBP11.15□□□□□ -0.63
CTDSPL2-201ENST00000260327 PAIP2Q9BPZ3 127 aaKnown RBP11.15□□□□□ -0.63
CTDSPL2-201ENST00000260327 PIK3C2GO75747 1445 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 MARCKSP29966 332 aaPredicted RBP11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 AFMP43652 599 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 USP5P45974 858 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 TSG101Q99816 390 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 CLGNO14967 610 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 CHMLP26374 656 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 SARNPP82979 210 aaKnown RBP11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 RSRC1Q96IZ7 334 aaKnown RBP11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 SELENOSQ9BQE4 189 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 DNAJC5BQ9UF47 199 aa11.14□□□□□ -0.63
CTDSPL2-201ENST00000260327 ADGRL1O94910 1474 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 GRIN2AQ12879 1464 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 RANBP6O60518 1105 aaKnown RBP11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 IARSP41252 1262 aaKnown RBP11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 TERF1P54274 439 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 MRPS27Q92552 414 aaKnown RBP11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 GUCA1BQ9UMX6 200 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 POLKQ9UBT6 870 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 CHST3Q7LGC8 479 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 CARD6Q9BX69 1037 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 SMIM23A6NLE4 172 aa11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 TRIM21P19474 475 aaKnown RBP11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 OAS2P29728 719 aaKnown RBP11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 CLNS1AP54105 237 aaKnown RBP11.13□□□□□ -0.63
CTDSPL2-201ENST00000260327 NMIQ13287 307 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms