RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ANTXR1Q9H6X2 564 aa33.67■■■□□ 2.98
CCM2-201ENST00000258781 MAP4K4O95819 1239 aaPredicted RBP33.67■■■□□ 2.98
CCM2-201ENST00000258781 UBN2Q6ZU65 1347 aa33.67■■■□□ 2.98
CCM2-201ENST00000258781 PLA2G12BQ9BX93 195 aa33.66■■■□□ 2.98
CCM2-201ENST00000258781 RTCBQ9Y3I0 505 aaKnown RBP33.66■■■□□ 2.98
CCM2-201ENST00000258781 NLRP10Q86W26 655 aa33.65■■■□□ 2.98
CCM2-201ENST00000258781 ZBTB38Q8NAP3 1195 aaPredicted RBP33.65■■■□□ 2.98
CCM2-201ENST00000258781 CCDC8Q9H0W5 538 aaPredicted RBP33.65■■■□□ 2.98
CCM2-201ENST00000258781 CHMP3Q9Y3E7 222 aa33.65■■■□□ 2.98
CCM2-201ENST00000258781 ZNF34Q8IZ26 560 aa33.65■■■□□ 2.98
CCM2-201ENST00000258781 RGPD3A6NKT7 1758 aaPredicted RBP33.64■■■□□ 2.98
CCM2-201ENST00000258781 RGPD4Q7Z3J3 1758 aa33.64■■■□□ 2.98
CCM2-201ENST00000258781 AK7Q96M32 723 aa33.64■■■□□ 2.98
CCM2-201ENST00000258781 CDHR2Q9BYE9 1310 aa33.63■■■□□ 2.97
CCM2-201ENST00000258781 TFCP2Q12800 502 aa33.63■■■□□ 2.97
CCM2-201ENST00000258781 TNNI3KQ59H18 835 aa33.63■■■□□ 2.97
CCM2-201ENST00000258781 EVI5LQ96CN4 794 aa33.63■■■□□ 2.97
CCM2-201ENST00000258781 FPGT-TNNI3KV9GXZ4 949 aa33.63■■■□□ 2.97
CCM2-201ENST00000258781 SLKQ9H2G2 1235 aaPredicted RBP33.63■■■□□ 2.97
CCM2-201ENST00000258781 TLR7Q9NYK1 1049 aaKnown RBP33.63■■■□□ 2.97
CCM2-201ENST00000258781 MYH3P11055 1940 aa33.61■■■□□ 2.97
CCM2-201ENST00000258781 MCCP23508 829 aa33.61■■■□□ 2.97
CCM2-201ENST00000258781 ANO2Q9NQ90 1003 aa33.61■■■□□ 2.97
CCM2-201ENST00000258781 CIAO1O76071 339 aa33.6■■■□□ 2.97
CCM2-201ENST00000258781 PHF14O94880 888 aa33.6■■■□□ 2.97
CCM2-201ENST00000258781 ARHGEF1Q92888 912 aaKnown RBP33.6■■■□□ 2.97
CCM2-201ENST00000258781 FAM89AQ96GI7 184 aa33.6■■■□□ 2.97
CCM2-201ENST00000258781 SRP68Q9UHB9 627 aaKnown RBP33.6■■■□□ 2.97
CCM2-201ENST00000258781 SGSM2O43147 1006 aa33.59■■■□□ 2.97
CCM2-201ENST00000258781 IL15P40933 162 aaPredicted RBP33.59■■■□□ 2.97
CCM2-201ENST00000258781 BCL2L12Q9HB09 334 aa33.59■■■□□ 2.97
CCM2-201ENST00000258781 GPR108Q9NPR9 543 aa33.59■■■□□ 2.97
CCM2-201ENST00000258781 NARFQ9UHQ1 456 aa33.59■■■□□ 2.97
CCM2-201ENST00000258781 K7ELQ4 463 aaPredicted RBP33.59■■■□□ 2.97
CCM2-201ENST00000258781 ATG9AQ7Z3C6 839 aa33.59■■■□□ 2.97
CCM2-201ENST00000258781 SYNE4Q8N205 404 aa33.58■■■□□ 2.97
CCM2-201ENST00000258781 ANAPC15P60006 121 aa33.57■■■□□ 2.96
CCM2-201ENST00000258781 USPL1Q5W0Q7 1092 aa33.57■■■□□ 2.96
CCM2-201ENST00000258781 FBXO3Q9UK99 471 aa33.57■■■□□ 2.96
CCM2-201ENST00000258781 EYA2O00167 538 aa33.56■■■□□ 2.96
CCM2-201ENST00000258781 CD2BP2O95400 341 aaKnown RBP33.56■■■□□ 2.96
CCM2-201ENST00000258781 CLEC4GQ6UXB4 293 aa33.56■■■□□ 2.96
CCM2-201ENST00000258781 RUFY2Q8WXA3 655 aa33.56■■■□□ 2.96
CCM2-201ENST00000258781 IL17RAQ96F46 866 aa33.56■■■□□ 2.96
CCM2-201ENST00000258781 DBNLQ9UJU6 430 aaKnown RBP33.56■■■□□ 2.96
CCM2-201ENST00000258781 ZNF652Q9Y2D9 606 aa33.56■■■□□ 2.96
CCM2-201ENST00000258781 CSF1RP07333 972 aa33.56■■■□□ 2.96
CCM2-201ENST00000258781 DIAPH3Q9NSV4 1193 aa33.56■■■□□ 2.96
CCM2-201ENST00000258781 NIP7Q9Y221 180 aaKnown RBP eCLIP33.56■■■□□ 2.96
CCM2-201ENST00000258781 HIP1O00291 1037 aa33.55■■■□□ 2.96
CCM2-201ENST00000258781 ATP5JP18859 108 aa33.55■■■□□ 2.96
CCM2-201ENST00000258781 NFKBIBQ15653 356 aa33.54■■■□□ 2.96
CCM2-201ENST00000258781 TRAPPC3LQ5T215 181 aa33.54■■■□□ 2.96
CCM2-201ENST00000258781 SUSD4Q5VX71 490 aa33.54■■■□□ 2.96
CCM2-201ENST00000258781 IL25Q9H293 177 aa33.54■■■□□ 2.96
CCM2-201ENST00000258781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.54■■■□□ 2.96
CCM2-201ENST00000258781 CCDC57Q2TAC2 916 aa33.54■■■□□ 2.96
CCM2-201ENST00000258781 TRMT112Q9UI30 125 aaKnown RBP33.54■■■□□ 2.96
CCM2-201ENST00000258781 ZPR1O75312 459 aa33.52■■■□□ 2.96
CCM2-201ENST00000258781 ST18O60284 1047 aa33.52■■■□□ 2.96
CCM2-201ENST00000258781 ZNF827Q17R98 1081 aa33.52■■■□□ 2.96
CCM2-201ENST00000258781 SPRYD3Q8NCJ5 442 aa33.52■■■□□ 2.96
CCM2-201ENST00000258781 RAD50Q92878 1312 aa33.52■■■□□ 2.96
CCM2-201ENST00000258781 RGL2O15211 777 aa33.51■■■□□ 2.96
CCM2-201ENST00000258781 RFC4P35249 363 aa33.51■■■□□ 2.96
CCM2-201ENST00000258781 BOLA2Q9H3K6 86 aa33.51■■■□□ 2.96
CCM2-201ENST00000258781 ZNF609O15014 1411 aa33.51■■■□□ 2.95
CCM2-201ENST00000258781 FAM177BA6PVY3 158 aa33.5■■■□□ 2.95
CCM2-201ENST00000258781 ADRA2BP18089 450 aa33.5■■■□□ 2.95
CCM2-201ENST00000258781 TBC1D9BQ66K14 1250 aa33.5■■■□□ 2.95
CCM2-201ENST00000258781 CWC27Q6UX04 472 aaKnown RBP33.5■■■□□ 2.95
CCM2-201ENST00000258781 CHMP5Q9NZZ3 219 aa33.5■■■□□ 2.95
CCM2-201ENST00000258781 COL24A1Q17RW2 1714 aa33.5■■■□□ 2.95
CCM2-201ENST00000258781 PARP10Q53GL7 1025 aa33.5■■■□□ 2.95
CCM2-201ENST00000258781 ZNF594Q96JF6 807 aaPredicted RBP33.5■■■□□ 2.95
CCM2-201ENST00000258781 DDX60Q8IY21 1712 aaKnown RBP33.49■■■□□ 2.95
CCM2-201ENST00000258781 SSFA2P28290 1259 aa33.49■■■□□ 2.95
CCM2-201ENST00000258781 DBNDD2Q9BQY9 259 aa33.49■■■□□ 2.95
CCM2-201ENST00000258781 DDIT3P35638 169 aa33.48■■■□□ 2.95
CCM2-201ENST00000258781 LRRC24Q50LG9 513 aa33.48■■■□□ 2.95
CCM2-201ENST00000258781 KIAA1211Q6ZU35 1233 aa33.48■■■□□ 2.95
CCM2-201ENST00000258781 IL27Q8NEV9 243 aa33.48■■■□□ 2.95
CCM2-201ENST00000258781 LSG1Q9H089 658 aaKnown RBP33.48■■■□□ 2.95
CCM2-201ENST00000258781 NTSR2O95665 410 aa33.48■■■□□ 2.95
CCM2-201ENST00000258781 HSPA4P34932 840 aa33.48■■■□□ 2.95
CCM2-201ENST00000258781 EN1Q05925 392 aaPredicted RBP33.48■■■□□ 2.95
CCM2-201ENST00000258781 IFIT5Q13325 482 aaKnown RBP33.48■■■□□ 2.95
CCM2-201ENST00000258781 AKT1S1Q96B36 256 aa33.48■■■□□ 2.95
CCM2-201ENST00000258781 RFX7Q2KHR2 1363 aa33.48■■■□□ 2.95
CCM2-201ENST00000258781 CTSWP56202 376 aa33.47■■■□□ 2.95
CCM2-201ENST00000258781 BICDL1Q6ZP65 573 aa33.47■■■□□ 2.95
CCM2-201ENST00000258781 UTP14AQ9BVJ6 771 aaKnown RBP33.47■■■□□ 2.95
CCM2-201ENST00000258781 LAMB2P55268 1798 aa33.46■■■□□ 2.95
CCM2-201ENST00000258781 IRS4O14654 1257 aaPredicted RBP33.46■■■□□ 2.95
CCM2-201ENST00000258781 EZH2Q15910 746 aaKnown RBP33.46■■■□□ 2.95
CCM2-201ENST00000258781 CAMKK2Q96RR4 588 aa33.46■■■□□ 2.95
CCM2-201ENST00000258781 TTLL11Q8NHH1 800 aa33.46■■■□□ 2.95
CCM2-201ENST00000258781 SH3TC1Q8TE82 1336 aa33.45■■■□□ 2.95
CCM2-201ENST00000258781 FSD1Q9BTV5 496 aa33.45■■■□□ 2.95
CCM2-201ENST00000258781 PALD1Q9ULE6 856 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms