RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 ANKRD36CQ5JPF3 1778 aa16.78■□□□□ 0.28
APOBEC3A-201ENST00000249116 AOC3Q16853 763 aa16.78■□□□□ 0.28
APOBEC3A-201ENST00000249116 DPP8Q6V1X1 898 aaPredicted RBP16.78■□□□□ 0.28
APOBEC3A-201ENST00000249116 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
APOBEC3A-201ENST00000249116 MPNDQ8N594 471 aa16.78■□□□□ 0.28
APOBEC3A-201ENST00000249116 ADAMTSL1Q8N6G6 1762 aa16.77■□□□□ 0.28
APOBEC3A-201ENST00000249116 GRAPQ13588 217 aa16.77■□□□□ 0.27
APOBEC3A-201ENST00000249116 SLC51AQ86UW1 340 aa16.77■□□□□ 0.27
APOBEC3A-201ENST00000249116 GRAPLQ8TC17 118 aaPredicted RBP16.77■□□□□ 0.27
APOBEC3A-201ENST00000249116 RTFDC1Q9BY42 306 aaPredicted RBP16.77■□□□□ 0.27
APOBEC3A-201ENST00000249116 PRKRIP1Q9H875 184 aaPredicted RBP16.77■□□□□ 0.27
APOBEC3A-201ENST00000249116 HYPKQ9NX55 129 aa16.77■□□□□ 0.27
APOBEC3A-201ENST00000249116 EPS15P42566 896 aa16.76■□□□□ 0.27
APOBEC3A-201ENST00000249116 SCNN1DP51172 638 aa16.76■□□□□ 0.27
APOBEC3A-201ENST00000249116 CALD1Q05682 793 aaKnown RBP16.76■□□□□ 0.27
APOBEC3A-201ENST00000249116 DUSP27Q5VZP5 1158 aa16.76■□□□□ 0.27
APOBEC3A-201ENST00000249116 USP50Q70EL3 339 aaPredicted RBP16.76■□□□□ 0.27
APOBEC3A-201ENST00000249116 TMC4Q7Z404 712 aa16.76■□□□□ 0.27
APOBEC3A-201ENST00000249116 ZNRF3Q9ULT6 936 aa16.76■□□□□ 0.27
APOBEC3A-201ENST00000249116 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
APOBEC3A-201ENST00000249116 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
APOBEC3A-201ENST00000249116 VEGFBP49765 207 aa16.73■□□□□ 0.27
APOBEC3A-201ENST00000249116 GNAI1P63096 354 aa16.73■□□□□ 0.27
APOBEC3A-201ENST00000249116 CXCL9Q07325 125 aa16.73■□□□□ 0.27
APOBEC3A-201ENST00000249116 KIAA2012Q0VF49 1180 aa16.73■□□□□ 0.27
APOBEC3A-201ENST00000249116 DEFB115Q30KQ5 88 aa16.73■□□□□ 0.27
APOBEC3A-201ENST00000249116 RASSF10A6NK89 507 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 ATP5J2-PTCD1G3V325 749 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 TNIP1Q15025 636 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 CIAPIN1Q6FI81 312 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 AIDAQ96BJ3 306 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 FAM89AQ96GI7 184 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 ADARB2Q9NS39 739 aaKnown RBP16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 IFT57Q9NWB7 429 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 GPRC5DQ9NZD1 345 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 ABT1Q9ULW3 272 aaKnown RBP16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 LTBP1Q14766 1721 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 LAMB2P55268 1798 aa16.72■□□□□ 0.27
APOBEC3A-201ENST00000249116 APAF1O14727 1248 aa16.71■□□□□ 0.27
APOBEC3A-201ENST00000249116 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
APOBEC3A-201ENST00000249116 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
APOBEC3A-201ENST00000249116 SF3B3Q15393 1217 aaKnown RBP16.71■□□□□ 0.27
APOBEC3A-201ENST00000249116 RIC3Q7Z5B4 369 aa16.71■□□□□ 0.27
APOBEC3A-201ENST00000249116 ZNF428Q96B54 188 aa16.71■□□□□ 0.27
APOBEC3A-201ENST00000249116 TRIM28Q13263 835 aaKnown RBP16.7■□□□□ 0.26
APOBEC3A-201ENST00000249116 BCL2L13Q9BXK5 485 aa16.7■□□□□ 0.26
APOBEC3A-201ENST00000249116 CHMP4AQ9BY43 222 aa16.7■□□□□ 0.26
APOBEC3A-201ENST00000249116 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
APOBEC3A-201ENST00000249116 FOXN1O15353 648 aa16.7■□□□□ 0.26
APOBEC3A-201ENST00000249116 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
APOBEC3A-201ENST00000249116 GMPSP49915 693 aaPredicted RBP16.7■□□□□ 0.26
APOBEC3A-201ENST00000249116 IRS4O14654 1257 aaPredicted RBP16.69■□□□□ 0.26
APOBEC3A-201ENST00000249116 RAD17O75943 681 aa16.69■□□□□ 0.26
APOBEC3A-201ENST00000249116 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
APOBEC3A-201ENST00000249116 ELL2O00472 640 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3A-201ENST00000249116 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3A-201ENST00000249116 CTCFP49711 727 aaPredicted RBP16.68■□□□□ 0.26
APOBEC3A-201ENST00000249116 WASHC4Q2M389 1173 aa16.68■□□□□ 0.26
APOBEC3A-201ENST00000249116 CELF1Q92879 486 aaKnown RBP16.68■□□□□ 0.26
APOBEC3A-201ENST00000249116 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
APOBEC3A-201ENST00000249116 WDR33Q9C0J8 1336 aaKnown RBP16.68■□□□□ 0.26
APOBEC3A-201ENST00000249116 ZBTB38Q8NAP3 1195 aaPredicted RBP16.67■□□□□ 0.26
APOBEC3A-201ENST00000249116 EYA3Q99504 573 aa16.67■□□□□ 0.26
APOBEC3A-201ENST00000249116 PHAXQ9H814 394 aaKnown RBP16.67■□□□□ 0.26
APOBEC3A-201ENST00000249116 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
APOBEC3A-201ENST00000249116 WBP1LQ9NX94 342 aa16.67■□□□□ 0.26
APOBEC3A-201ENST00000249116 DDX60Q8IY21 1712 aaKnown RBP16.67■□□□□ 0.26
APOBEC3A-201ENST00000249116 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
APOBEC3A-201ENST00000249116 DDX58O95786 925 aaKnown RBP16.66■□□□□ 0.26
APOBEC3A-201ENST00000249116 ECE1P42892 770 aa16.66■□□□□ 0.26
APOBEC3A-201ENST00000249116 MAP2K1Q02750 393 aaPredicted RBP16.66■□□□□ 0.26
APOBEC3A-201ENST00000249116 PAXIP1Q6ZW49 1069 aaPredicted RBP16.66■□□□□ 0.26
APOBEC3A-201ENST00000249116 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 YDJCA8MPS7 323 aa16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 H7C1D1 291 aa16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 TRAF5O00463 557 aa16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 RPS8P62241 208 aaKnown RBP16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 FMR1Q06787 632 aaKnown RBP eCLIP16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 CCDC30Q5VVM6 783 aa16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 CCDC191Q8NCU4 936 aa16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 ZC3H15Q8WU90 426 aaKnown RBP16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 MYD88Q99836 296 aa16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 CNOT7Q9UIV1 285 aaKnown RBP16.65■□□□□ 0.26
APOBEC3A-201ENST00000249116 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.26
APOBEC3A-201ENST00000249116 GPSM2P81274 684 aa16.64■□□□□ 0.25
APOBEC3A-201ENST00000249116 CST9Q5W186 159 aa16.64■□□□□ 0.25
APOBEC3A-201ENST00000249116 C8orf58Q8NAV2 365 aa16.64■□□□□ 0.25
APOBEC3A-201ENST00000249116 PGAP2Q9UHJ9 254 aa16.64■□□□□ 0.25
APOBEC3A-201ENST00000249116 TLL2Q9Y6L7 1015 aa16.64■□□□□ 0.25
APOBEC3A-201ENST00000249116 RIMBP2O15034 1052 aa16.63■□□□□ 0.25
APOBEC3A-201ENST00000249116 PCCAP05165 728 aaPredicted RBP16.63■□□□□ 0.25
APOBEC3A-201ENST00000249116 DPF2Q92785 391 aa16.63■□□□□ 0.25
APOBEC3A-201ENST00000249116 CAPNS2Q96L46 248 aa16.63■□□□□ 0.25
APOBEC3A-201ENST00000249116 DBNDD1Q9H9R9 158 aa16.63■□□□□ 0.25
APOBEC3A-201ENST00000249116 CWC25Q9NXE8 425 aaPredicted RBP16.63■□□□□ 0.25
APOBEC3A-201ENST00000249116 POLLQ9UGP5 575 aa16.63■□□□□ 0.25
APOBEC3A-201ENST00000249116 TAF1P21675 1872 aa16.63■□□□□ 0.25
APOBEC3A-201ENST00000249116 PDE8AO60658 829 aa16.62■□□□□ 0.25
APOBEC3A-201ENST00000249116 CELF2O95319 508 aaKnown RBP16.62■□□□□ 0.25
APOBEC3A-201ENST00000249116 GRM1Q13255 1194 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms