RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TIAM2Q8IVF5 1701 aa30.95■■■□□ 2.55
SDF2L1-201ENST00000248958 MYH3P11055 1940 aa30.95■■■□□ 2.55
SDF2L1-201ENST00000248958 PSMD1Q99460 953 aa30.95■■■□□ 2.55
SDF2L1-201ENST00000248958 F6X3S4 739 aa30.94■■■□□ 2.54
SDF2L1-201ENST00000248958 H7C1W4 665 aa30.94■■■□□ 2.54
SDF2L1-201ENST00000248958 SP8Q8IXZ3 490 aa30.94■■■□□ 2.54
SDF2L1-201ENST00000248958 SNED1Q8TER0 1413 aa30.94■■■□□ 2.54
SDF2L1-201ENST00000248958 SSH1Q8WYL5 1049 aa30.94■■■□□ 2.54
SDF2L1-201ENST00000248958 C1QTNF8P60827 252 aa30.93■■■□□ 2.54
SDF2L1-201ENST00000248958 CCDC152Q4G0S7 254 aa30.93■■■□□ 2.54
SDF2L1-201ENST00000248958 BEND3Q5T5X7 828 aa30.93■■■□□ 2.54
SDF2L1-201ENST00000248958 OLFM4Q6UX06 510 aa30.93■■■□□ 2.54
SDF2L1-201ENST00000248958 TAF1P21675 1872 aa30.92■■■□□ 2.54
SDF2L1-201ENST00000248958 ZNF526Q8TF50 670 aaPredicted RBP30.91■■■□□ 2.54
SDF2L1-201ENST00000248958 JARID2Q92833 1246 aaPredicted RBP30.91■■■□□ 2.54
SDF2L1-201ENST00000248958 KDM2BQ8NHM5 1336 aa30.91■■■□□ 2.54
SDF2L1-201ENST00000248958 UBE3BQ7Z3V4 1068 aa30.9■■■□□ 2.54
SDF2L1-201ENST00000248958 SMC4Q9NTJ3 1288 aa30.9■■■□□ 2.54
SDF2L1-201ENST00000248958 ALDH1L1O75891 902 aa30.89■■■□□ 2.54
SDF2L1-201ENST00000248958 PLA2G12BQ9BX93 195 aa30.89■■■□□ 2.54
SDF2L1-201ENST00000248958 CTSWP56202 376 aa30.88■■■□□ 2.53
SDF2L1-201ENST00000248958 ZBED9Q6R2W3 1325 aa30.88■■■□□ 2.53
SDF2L1-201ENST00000248958 LRRC37AA6NMS7 1700 aa30.87■■■□□ 2.53
SDF2L1-201ENST00000248958 IARSP41252 1262 aaKnown RBP30.87■■■□□ 2.53
SDF2L1-201ENST00000248958 BRPF1P55201 1214 aaPredicted RBP30.87■■■□□ 2.53
SDF2L1-201ENST00000248958 SLC4A10Q6U841 1118 aa30.87■■■□□ 2.53
SDF2L1-201ENST00000248958 SUPT20HQ8NEM7 779 aa30.87■■■□□ 2.53
SDF2L1-201ENST00000248958 CELF1Q92879 486 aaKnown RBP30.87■■■□□ 2.53
SDF2L1-201ENST00000248958 SRCIN1Q9C0H9 1055 aa30.87■■■□□ 2.53
SDF2L1-201ENST00000248958 VPS33BQ9H267 617 aa30.87■■■□□ 2.53
SDF2L1-201ENST00000248958 CASP7P55210 303 aa30.86■■■□□ 2.53
SDF2L1-201ENST00000248958 RPS8P62241 208 aaKnown RBP30.86■■■□□ 2.53
SDF2L1-201ENST00000248958 DPY19L2Q6NUT2 758 aa30.86■■■□□ 2.53
SDF2L1-201ENST00000248958 BCL2L13Q9BXK5 485 aa30.86■■■□□ 2.53
SDF2L1-201ENST00000248958 ZNF277Q9NRM2 450 aaPredicted RBP30.86■■■□□ 2.53
SDF2L1-201ENST00000248958 MPNDQ8N594 471 aa30.85■■■□□ 2.53
SDF2L1-201ENST00000248958 RTL9Q8NET4 1388 aa30.84■■■□□ 2.53
SDF2L1-201ENST00000248958 GLTPD2A6NH11 291 aa30.84■■■□□ 2.53
SDF2L1-201ENST00000248958 TTLL11Q8NHH1 800 aa30.84■■■□□ 2.53
SDF2L1-201ENST00000248958 DPP8Q6V1X1 898 aaPredicted RBP30.83■■■□□ 2.53
SDF2L1-201ENST00000248958 RTFDC1Q9BY42 306 aaPredicted RBP30.83■■■□□ 2.53
SDF2L1-201ENST00000248958 RARSP54136 660 aaKnown RBP30.82■■■□□ 2.52
SDF2L1-201ENST00000248958 CDC5LQ99459 802 aaKnown RBP30.82■■■□□ 2.52
SDF2L1-201ENST00000248958 SEC31BQ9NQW1 1179 aa30.82■■■□□ 2.52
SDF2L1-201ENST00000248958 C9orf78Q9NZ63 289 aaPredicted RBP30.82■■■□□ 2.52
SDF2L1-201ENST00000248958 GRM8O00222 908 aa30.81■■■□□ 2.52
SDF2L1-201ENST00000248958 ANKRD18AQ8IVF6 992 aa30.81■■■□□ 2.52
SDF2L1-201ENST00000248958 JDP2Q8WYK2 163 aa30.81■■■□□ 2.52
SDF2L1-201ENST00000248958 CCDC85AQ96PX6 553 aaPredicted RBP30.8■■■□□ 2.52
SDF2L1-201ENST00000248958 CSF1RP07333 972 aa30.78■■■□□ 2.52
SDF2L1-201ENST00000248958 COL4A1P02462 1669 aa30.78■■■□□ 2.52
SDF2L1-201ENST00000248958 KIF16BQ96L93 1317 aa30.77■■■□□ 2.52
SDF2L1-201ENST00000248958 KIF3CO14782 793 aa30.77■■■□□ 2.52
SDF2L1-201ENST00000248958 SLC51AQ86UW1 340 aa30.77■■■□□ 2.52
SDF2L1-201ENST00000248958 LARGE2Q8N3Y3 721 aa30.77■■■□□ 2.52
SDF2L1-201ENST00000248958 API5Q9BZZ5 524 aaKnown RBP30.77■■■□□ 2.52
SDF2L1-201ENST00000248958 GREM2Q9H772 168 aa30.77■■■□□ 2.52
SDF2L1-201ENST00000248958 NOB1Q9ULX3 412 aaKnown RBP30.77■■■□□ 2.52
SDF2L1-201ENST00000248958 NMRK2Q9NPI5 230 aa30.76■■■□□ 2.51
SDF2L1-201ENST00000248958 NSFL1CQ9UNZ2 370 aaKnown RBP30.76■■■□□ 2.51
SDF2L1-201ENST00000248958 WDR90Q96KV7 1748 aa30.76■■■□□ 2.51
SDF2L1-201ENST00000248958 FZD9O00144 591 aa30.75■■■□□ 2.51
SDF2L1-201ENST00000248958 PPIP5K2O43314 1243 aa30.75■■■□□ 2.51
SDF2L1-201ENST00000248958 ARHGAP45Q92619 1136 aa30.75■■■□□ 2.51
SDF2L1-201ENST00000248958 UTYO14607 1347 aa30.74■■■□□ 2.51
SDF2L1-201ENST00000248958 NIM1KQ8IY84 436 aa30.73■■■□□ 2.51
SDF2L1-201ENST00000248958 RRAGCQ9HB90 399 aa30.73■■■□□ 2.51
SDF2L1-201ENST00000248958 BSDC1Q9NW68 430 aaPredicted RBP30.73■■■□□ 2.51
SDF2L1-201ENST00000248958 PODXL2Q9NZ53 605 aa30.73■■■□□ 2.51
SDF2L1-201ENST00000248958 LTBP1Q14766 1721 aa30.73■■■□□ 2.51
SDF2L1-201ENST00000248958 DUOX1Q9NRD9 1551 aa30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 ITGA6P23229 1130 aa30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 IGHMBP2P38935 993 aaKnown RBP30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 CCT4P50991 539 aaKnown RBP30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 EIF6P56537 245 aaKnown RBP30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 GPSM2P81274 684 aa30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 FOXO4P98177 505 aa30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 KIAA2012Q0VF49 1180 aa30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 AOC3Q16853 763 aa30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 EYA3Q99504 573 aa30.72■■■□□ 2.51
SDF2L1-201ENST00000248958 SPEF2Q9C093 1822 aa30.71■■■□□ 2.51
SDF2L1-201ENST00000248958 ANKRD18BA2A2Z9 1011 aa30.71■■■□□ 2.51
SDF2L1-201ENST00000248958 IPO8O15397 1037 aaKnown RBP30.71■■■□□ 2.51
SDF2L1-201ENST00000248958 VEGFAP15692 232 aaPredicted RBP30.71■■■□□ 2.51
SDF2L1-201ENST00000248958 FAM161AQ3B820 660 aa30.7■■■□□ 2.51
SDF2L1-201ENST00000248958 C16orf71Q8IYS4 520 aaPredicted RBP30.7■■■□□ 2.51
SDF2L1-201ENST00000248958 DDNO94850 711 aaPredicted RBP30.69■■■□□ 2.5
SDF2L1-201ENST00000248958 ANKIB1Q9P2G1 1089 aa30.69■■■□□ 2.5
SDF2L1-201ENST00000248958 COL4A5P29400 1685 aa30.68■■■□□ 2.5
SDF2L1-201ENST00000248958 C6orf229H3BNL8 230 aa30.68■■■□□ 2.5
SDF2L1-201ENST00000248958 TOMM70O94826 608 aa30.68■■■□□ 2.5
SDF2L1-201ENST00000248958 NBPF7P0C2Y1 421 aaPredicted RBP30.68■■■□□ 2.5
SDF2L1-201ENST00000248958 IFIT5Q13325 482 aaKnown RBP30.68■■■□□ 2.5
SDF2L1-201ENST00000248958 WASHC4Q2M389 1173 aa30.68■■■□□ 2.5
SDF2L1-201ENST00000248958 MPHOSPH8Q99549 860 aa30.68■■■□□ 2.5
SDF2L1-201ENST00000248958 XDHP47989 1333 aa30.68■■■□□ 2.5
SDF2L1-201ENST00000248958 LMBR1LQ6UX01 489 aa30.67■■■□□ 2.5
SDF2L1-201ENST00000248958 TBC1D16Q8TBP0 767 aa30.67■■■□□ 2.5
SDF2L1-201ENST00000248958 POLLQ9UGP5 575 aa30.67■■■□□ 2.5
SDF2L1-201ENST00000248958 GGA1Q9UJY5 639 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms