RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 CDC25BP30305 580 aa11.72□□□□□ -0.53
CLDN18-201ENST00000183605 PPP1R13BQ96KQ4 1090 aa11.72□□□□□ -0.53
CLDN18-201ENST00000183605 ZNF396Q96N95 335 aaPredicted RBP11.72□□□□□ -0.53
CLDN18-201ENST00000183605 ZNF446Q9NWS9 450 aa11.72□□□□□ -0.53
CLDN18-201ENST00000183605 STK38Q15208 465 aa11.71□□□□□ -0.53
CLDN18-201ENST00000183605 C9orf78Q9NZ63 289 aaPredicted RBP11.71□□□□□ -0.53
CLDN18-201ENST00000183605 STAP2Q9UGK3 403 aa11.71□□□□□ -0.53
CLDN18-201ENST00000183605 CCDC9Q9Y3X0 531 aaKnown RBP11.71□□□□□ -0.53
CLDN18-201ENST00000183605 ELP1O95163 1332 aa11.71□□□□□ -0.54
CLDN18-201ENST00000183605 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.54
CLDN18-201ENST00000183605 ETF1P62495 437 aaKnown RBP11.71□□□□□ -0.54
CLDN18-201ENST00000183605 CREB3L3Q68CJ9 461 aa11.71□□□□□ -0.54
CLDN18-201ENST00000183605 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.54
CLDN18-201ENST00000183605 EPC1Q9H2F5 836 aa11.71□□□□□ -0.54
CLDN18-201ENST00000183605 A0A1B0GUL7 405 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 PHACTR2O75167 634 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 PLA2G4AP47712 749 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 UTP14AQ9BVJ6 771 aaKnown RBP11.7□□□□□ -0.54
CLDN18-201ENST00000183605 SRRTQ9BXP5 876 aaKnown RBP11.7□□□□□ -0.54
CLDN18-201ENST00000183605 RRP15Q9Y3B9 282 aaKnown RBP11.7□□□□□ -0.54
CLDN18-201ENST00000183605 FHOD1Q9Y613 1164 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 TCHHQ07283 1943 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 ZSCAN12O43309 604 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 EIF3JO75822 258 aaKnown RBP11.7□□□□□ -0.54
CLDN18-201ENST00000183605 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
CLDN18-201ENST00000183605 TTLL5Q6EMB2 1281 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 AACSQ86V21 672 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 XPO4Q9C0E2 1151 aaKnown RBP11.7□□□□□ -0.54
CLDN18-201ENST00000183605 JAK2O60674 1132 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 MYOM2P54296 1465 aa11.7□□□□□ -0.54
CLDN18-201ENST00000183605 SPATA31D1Q6ZQQ2 1576 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 TULP2O00295 520 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 IVLP07476 585 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 ORC3Q9UBD5 711 aaPredicted RBP11.69□□□□□ -0.54
CLDN18-201ENST00000183605 EPB41L2O43491 1005 aaKnown RBP11.69□□□□□ -0.54
CLDN18-201ENST00000183605 DHX8Q14562 1220 aaKnown RBP11.69□□□□□ -0.54
CLDN18-201ENST00000183605 JAKMIP3Q5VZ66 844 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 LRRN4CLQ8ND94 238 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 LRRC2Q9BYS8 371 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 CCZ1BP86790 482 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 CCZ1P86791 482 aaPredicted RBP11.69□□□□□ -0.54
CLDN18-201ENST00000183605 PGBD1Q96JS3 809 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 ZSWIM6Q9HCJ5 1215 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 ECHDC1Q9NTX5 307 aa11.69□□□□□ -0.54
CLDN18-201ENST00000183605 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
CLDN18-201ENST00000183605 ADGRB2O60241 1585 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 ERLIN1O75477 346 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 TOP1P11387 765 aaKnown RBP11.68□□□□□ -0.54
CLDN18-201ENST00000183605 H2AFXP16104 143 aaPredicted RBP11.68□□□□□ -0.54
CLDN18-201ENST00000183605 FOXO3O43524 673 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 DHX16O60231 1041 aaKnown RBP11.68□□□□□ -0.54
CLDN18-201ENST00000183605 G3BP1Q13283 466 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLDN18-201ENST00000183605 LRRFIP1Q32MZ4 808 aaKnown RBP11.68□□□□□ -0.54
CLDN18-201ENST00000183605 GOLGA5Q8TBA6 731 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 BOLA2Q9H3K6 86 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 ZSCAN16Q9H4T2 348 aaPredicted RBP11.68□□□□□ -0.54
CLDN18-201ENST00000183605 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 ANKRD65E5RJM6 399 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 TUBB4AP04350 444 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 HSP90AA4PQ58FG1 418 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 SYNE3Q6ZMZ3 975 aa11.68□□□□□ -0.54
CLDN18-201ENST00000183605 LTV1Q96GA3 475 aaPredicted RBP11.68□□□□□ -0.54
CLDN18-201ENST00000183605 HIP1O00291 1037 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 SLC3A2P08195 630 aaKnown RBP11.67□□□□□ -0.54
CLDN18-201ENST00000183605 ICE2Q659A1 982 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 CCDC12Q8WUD4 166 aaPredicted RBP11.67□□□□□ -0.54
CLDN18-201ENST00000183605 SLC26A8Q96RN1 970 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 ACBD3Q9H3P7 528 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 LRRC7Q96NW7 1537 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 A0A1B0GVL5 298 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 AMPHP49418 695 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 CCT2P78371 535 aaKnown RBP11.67□□□□□ -0.54
CLDN18-201ENST00000183605 PPP2R3AQ06190 1150 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 SARM1Q6SZW1 724 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
CLDN18-201ENST00000183605 IMPACTQ9P2X3 320 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 PIK3C2BO00750 1634 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 AOX1Q06278 1338 aa11.67□□□□□ -0.54
CLDN18-201ENST00000183605 LOC102724159A0A0B4J2E5 919 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 EFCAB8A8MWE9 144 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 UBASH3AP57075 661 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 IQCB1Q15051 598 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 PWP2Q15269 919 aaKnown RBP11.66□□□□□ -0.54
CLDN18-201ENST00000183605 E4F1Q66K89 784 aaPredicted RBP11.66□□□□□ -0.54
CLDN18-201ENST00000183605 FAM227BQ96M60 508 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 TM6SF1Q9BZW5 370 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 FTOQ9C0B1 505 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLDN18-201ENST00000183605 ADAM21Q9UKJ8 722 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
CLDN18-201ENST00000183605 CBFA2T2O43439 604 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 JRKLQ9Y4A0 524 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 FAM160A1Q05DH4 1040 aa11.66□□□□□ -0.54
CLDN18-201ENST00000183605 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
CLDN18-201ENST00000183605 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms