RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Hmg20bQ9Z104 317 aa15.28■□□□□ 0.04
Traf6-201ENSMUST00000004949 AlkP97793 1621 aa15.27■□□□□ 0.04
Traf6-201ENSMUST00000004949 Ppp1r9bQ6R891 817 aaKnown RBP15.27■□□□□ 0.04
Traf6-201ENSMUST00000004949 Ppp1r3fQ9JIG4 799 aa15.27■□□□□ 0.04
Traf6-201ENSMUST00000004949 CenphQ9QYM8 241 aa15.27■□□□□ 0.04
Traf6-201ENSMUST00000004949 Luzp1Q8R4U7 1068 aaKnown RBP15.27■□□□□ 0.04
Traf6-201ENSMUST00000004949 RestQ8VIG1 1082 aa15.27■□□□□ 0.04
Traf6-201ENSMUST00000004949 Snrpa1P57784 255 aaKnown RBP15.27■□□□□ 0.03
Traf6-201ENSMUST00000004949 Cavin2Q63918 418 aaKnown RBP15.27■□□□□ 0.03
Traf6-201ENSMUST00000004949 Rbm17Q8JZX4 405 aaKnown RBP15.27■□□□□ 0.03
Traf6-201ENSMUST00000004949 ParnQ8VDG3 624 aa15.27■□□□□ 0.03
Traf6-201ENSMUST00000004949 Ets1P27577 440 aa15.27■□□□□ 0.03
Traf6-201ENSMUST00000004949 Pm20d1Q8C165 503 aa15.26■□□□□ 0.03
Traf6-201ENSMUST00000004949 Tbc1d32Q3URV1 1296 aa15.26■□□□□ 0.03
Traf6-201ENSMUST00000004949 Api5O35841 504 aaKnown RBP15.26■□□□□ 0.03
Traf6-201ENSMUST00000004949 Cdcp1Q5U462 833 aa15.26■□□□□ 0.03
Traf6-201ENSMUST00000004949 Tbc1d2bQ3U0J8 965 aa15.26■□□□□ 0.03
Traf6-201ENSMUST00000004949 Ccdc150Q8CDI7 1110 aa15.26■□□□□ 0.03
Traf6-201ENSMUST00000004949 Knop1Q9Z2Q2 478 aaKnown RBP15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Rbm10Q99KG3 930 aaKnown RBP15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Sh3tc1G3X9F6 1346 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Ttll12Q3UDE2 639 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Large2Q5XPT3 690 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Kif24Q6NWW5 1356 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Nfxl1E9Q8I7 918 aaKnown RBP15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Sik1Q60670 779 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Fbxo2Q80UW2 297 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Foxo3Q9WVH4 672 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Usp54Q8BL06 1588 aaKnown RBP15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Lrrfip1Q3UZ39 729 aaKnown RBP15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Lrrc45Q8CIM1 670 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 CenpqQ9CPQ5 267 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 LlphQ9D945 130 aaKnown RBP15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Sbno1Q689Z5 1390 aa15.25■□□□□ 0.03
Traf6-201ENSMUST00000004949 Cep112Q5PR68 954 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Tekt3Q6X6Z7 490 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Bag4Q8CI61 457 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 ItpripQ3TNL8 555 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Pdcd6ipQ9WU78 869 aaKnown RBP15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Atp6v1aP50516 617 aaKnown RBP15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Rdm1Q9CQK3 281 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 CenppQ9CZ92 286 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Lonrf3Q9D4H7 753 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Unc13aQ4KUS2 1712 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Sdc2P43407 202 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Ranbp6Q8BIV3 1105 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Mapkapk5O54992 473 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Zrsr2Q62377 462 aaKnown RBP15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Xrcc4Q924T3 326 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Hdac9Q99N13 588 aa15.24■□□□□ 0.03
Traf6-201ENSMUST00000004949 Rnf216P58283 853 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 FancaQ9JL70 1439 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 Ak2Q9WTP6 239 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 TnksQ6PFX9 1320 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 Cc2d1bQ8BRN9 848 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 Serpina10Q8R121 448 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 Kdm6bQ5NCY0 1641 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 Sh3d21Q7TSG5 549 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 Aldh8a1Q8BH00 487 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 Sult6b1P0CC03 303 aa15.23■□□□□ 0.03
Traf6-201ENSMUST00000004949 Trim25Q61510 634 aaKnown RBP15.22■□□□□ 0.03
Traf6-201ENSMUST00000004949 Stox1B2RQL2 990 aa15.22■□□□□ 0.03
Traf6-201ENSMUST00000004949 Kif1bQ60575 1816 aaKnown RBP15.22■□□□□ 0.03
Traf6-201ENSMUST00000004949 Taok3Q8BYC6 898 aa15.22■□□□□ 0.03
Traf6-201ENSMUST00000004949 Uhrf1bp1lA2RSJ4 1457 aa15.22■□□□□ 0.03
Traf6-201ENSMUST00000004949 Mlh1Q9JK91 760 aa15.22■□□□□ 0.03
Traf6-201ENSMUST00000004949 Epb41l3Q9WV92 929 aa15.22■□□□□ 0.03
Traf6-201ENSMUST00000004949 Ifit2Q64112 472 aa15.22■□□□□ 0.03
Traf6-201ENSMUST00000004949 Ttc21aQ8C0S4 1314 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Prl3d3A0A0M6L0J6 224 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Adora1Q60612 326 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Fez1Q8K0X8 392 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Lrrc2Q8VDB8 371 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Fhod3Q76LL6 1578 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Mmp8O70138 465 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Mcm4P49717 862 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Luc7lQ9CYI4 371 aaKnown RBP15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Rad50P70388 1312 aa15.21■□□□□ 0.03
Traf6-201ENSMUST00000004949 Tbc1d8bA3KGB4 1114 aa15.21■□□□□ 0.02
Traf6-201ENSMUST00000004949 Eif4a1P60843 406 aaKnown RBP15.21■□□□□ 0.02
Traf6-201ENSMUST00000004949 Cep170Q6A065 1588 aa15.21■□□□□ 0.02
Traf6-201ENSMUST00000004949 Prr29B1ARI9 187 aa15.21■□□□□ 0.02
Traf6-201ENSMUST00000004949 Dok7Q18PE0 504 aa15.21■□□□□ 0.02
Traf6-201ENSMUST00000004949 Sp4Q62445 782 aa15.21■□□□□ 0.02
Traf6-201ENSMUST00000004949 Pcdhb5Q91XZ5 792 aa15.21■□□□□ 0.02
Traf6-201ENSMUST00000004949 Adgrl1Q80TR1 1466 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Eya2O08575 532 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Eif6O55135 245 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Prdm1Q60636 856 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Tsg101Q61187 391 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Znf219Q6IQX8 726 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 PtprtQ99M80 1454 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Cnnm2Q3TWN3 875 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Akr1c19G3X9Y6 323 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Brms1Q99N20 246 aa15.2■□□□□ 0.02
Traf6-201ENSMUST00000004949 Ampd3O08739 766 aa15.19■□□□□ 0.02
Traf6-201ENSMUST00000004949 Nucb1Q02819 459 aaKnown RBP15.19■□□□□ 0.02
Traf6-201ENSMUST00000004949 Liat1Q810M6 228 aa15.19■□□□□ 0.02
Traf6-201ENSMUST00000004949 Frat2Q8K025 231 aa15.19■□□□□ 0.02
Traf6-201ENSMUST00000004949 Dapk3O54784 448 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms