RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 SATL1Q86VE3 508 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 PRSS58Q8IYP2 241 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 ST6GALNAC3Q8NDV1 305 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 OR6S1Q8NH40 331 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 CNIH3Q8TBE1 160 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 TMEM163Q8TC26 289 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 DOK4Q8TEW6 326 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 SMAD5Q99717 465 aaKnown RBP15.66■□□□□ 0.1
PHGDH-234ENST00000642041 CCDC90BQ9GZT6 254 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 MMP25Q9NPA2 562 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 RASSF1Q9NS23 344 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 MRPS18AQ9NVS2 196 aaKnown RBP15.66■□□□□ 0.1
PHGDH-234ENST00000642041 FKBP14Q9NWM8 211 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 CHCHD3Q9NX63 227 aaKnown RBP15.66■□□□□ 0.1
PHGDH-234ENST00000642041 ZNF223Q9UK11 482 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-234ENST00000642041 ZGRF1Q86YA3 2104 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 CCDC160A6NGH7 325 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 ELOA3DA6NLF2 546 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-234ENST00000642041 ZNF99A8MXY4 864 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-234ENST00000642041 EFCAB9A8MZ26 197 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 FRS3O43559 492 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 IFNGP01579 166 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 CDK1P06493 297 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 HOXB4P17483 251 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-234ENST00000642041 HTR2AP28223 471 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 SLC6A6P31641 620 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 RPS18P62269 152 aaKnown RBP15.65■□□□□ 0.1
PHGDH-234ENST00000642041 IL10RAQ13651 578 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 MFSD13AQ14CX5 517 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 TBCEQ15813 527 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-234ENST00000642041 ELOA3BQ3SY89 546 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 SMARCD3Q6STE5 483 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 ZNF620Q6ZNG0 422 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 NDUFAF7Q7L592 441 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 GID4Q8IVV7 300 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 ELOA3Q8NG57 546 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 OR5W2Q8NH69 310 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 ZNF563Q8TA94 476 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 RNF217Q8TC41 542 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 RAB2BQ8WUD1 216 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 TMEM255BQ8WV15 326 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 EFHD2Q96C19 240 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-234ENST00000642041 TSSK6Q9BXA6 273 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 CDCA4Q9BXL8 241 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 TBC1D23Q9NUY8 699 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 ZNF226Q9NYT6 803 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 MYOTQ9UBF9 498 aa15.65■□□□□ 0.1
PHGDH-234ENST00000642041 NPIPA5A0A0B4J1W7 369 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 OR2W5A6NFC9 320 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 CLDN24A6NM45 220 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 NPIPA7E9PJI5 369 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 PRODHO43272 600 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 MAN1A2O60476 641 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 SEC14L2O76054 403 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 NPIPA8P0DM63 369 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 EPHA2P29317 976 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 EFNB1P98172 346 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 RAB40BQ12829 278 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 SKP2Q13309 424 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 B3GNT6Q6ZMB0 384 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 ZAR1Q86SH2 424 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 SHISA5Q8N114 240 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 ELP5Q8TE02 316 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 ST8SIA1Q92185 356 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 SGTBQ96EQ0 304 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 FAM46AQ96IP4 442 aaKnown RBP15.64■□□□□ 0.09
PHGDH-234ENST00000642041 GPR83Q9NYM4 423 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 TVP23BQ9NYZ1 205 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 B3GNT3Q9Y2A9 372 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 YARS2Q9Y2Z4 477 aaKnown RBP15.64■□□□□ 0.09
PHGDH-234ENST00000642041 SLC6A5Q9Y345 797 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 PTRH2Q9Y3E5 179 aaKnown RBP15.64■□□□□ 0.09
PHGDH-234ENST00000642041 ZNF337Q9Y3M9 751 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 FER1L5A0AVI2 2057 aa15.64■□□□□ 0.09
PHGDH-234ENST00000642041 TRBV11-1A0A0K0K1C0 115 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 FAM47E-STBD1D6RA91 191 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 FADS1O60427 444 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 LYPD3O95274 346 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 MT-ATP6P00846 226 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 SAGP10523 405 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-234ENST00000642041 PRG2P13727 222 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 APEHP13798 732 aaKnown RBP15.63■□□□□ 0.09
PHGDH-234ENST00000642041 PAICSP22234 425 aaKnown RBP15.63■□□□□ 0.09
PHGDH-234ENST00000642041 DCKP27707 260 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 FMO3P31513 532 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 EVI2BP34910 448 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 SYT6Q5T7P8 510 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-234ENST00000642041 NXNL2Q5VZ03 156 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 LCN10Q6JVE6 187 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 FAM199XQ6PEV8 388 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-234ENST00000642041 SHISA6Q6ZSJ9 500 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 LANCL3Q6ZV70 420 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 HMGN2P46Q86SG4 172 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 OAFQ86UD1 273 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 EGFL6Q8IUX8 553 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 CCDC71Q8IV32 467 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-234ENST00000642041 GPALPP1Q8IXQ4 340 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 CADM2Q8N3J6 435 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 LNX2Q8N448 690 aa15.63■□□□□ 0.09
PHGDH-234ENST00000642041 POGLUT1Q8NBL1 392 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms