RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 TMEM249Q2WGJ8 235 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 LIN52Q52LA3 116 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 C1QTNF12Q5T7M4 302 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 TMEM225Q6GV28 225 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 PAQR6Q6TCH4 344 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 LRRC74BQ6ZQY2 392 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 CADM2Q8N3J6 435 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 ZNF525Q8N782 197 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 ANKFN1Q8N957 763 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 POMGNT2Q8NAT1 580 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 PNPT1Q8TCS8 783 aaKnown RBP12.9□□□□□ -0.34
TARDBP-231ENST00000639599 HTRA1Q92743 480 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 CCDC115Q96NT0 180 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 MUS81Q96NY9 551 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 TNFRSF13CQ96RJ3 184 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 MANSC1Q9H8J5 431 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 MTHFD2LQ9H903 347 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-231ENST00000639599 SLC17A5Q9NRA2 495 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 CALML5Q9NZT1 146 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 P2RX2Q9UBL9 471 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 LPAR3Q9UBY5 353 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 FLVCR1Q9Y5Y0 555 aa12.9□□□□□ -0.34
TARDBP-231ENST00000639599 H7C417 338 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 RFXANKO14593 260 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 AP3D1O14617 1153 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 BGNP21810 368 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 APOBEC3AP31941 199 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-231ENST00000639599 PHC1P78364 1004 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 CEACAM7Q14002 265 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 GSTA3Q16772 222 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 C6orf52Q5T4I8 152 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 MRPL2Q5T653 305 aaKnown RBP12.89□□□□□ -0.35
TARDBP-231ENST00000639599 HHATQ5VTY9 493 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 CYB5R2Q6BCY4 276 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 NXNQ6DKJ4 435 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 SPATA19Q7Z5L4 167 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 AENQ8WTP8 325 aaKnown RBP12.89□□□□□ -0.35
TARDBP-231ENST00000639599 ZG16BQ96DA0 208 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 TMEM109Q9BVC6 243 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 SF3B5Q9BWJ5 86 aaKnown RBP12.89□□□□□ -0.35
TARDBP-231ENST00000639599 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 SHARPINQ9H0F6 387 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 MEAF6Q9HAF1 191 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 SSU72Q9NP77 194 aaKnown RBP12.89□□□□□ -0.35
TARDBP-231ENST00000639599 SLC7A10Q9NS82 523 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 ADPRHL2Q9NX46 363 aa12.89□□□□□ -0.35
TARDBP-231ENST00000639599 TRPC5OSA6NMA1 111 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 ZNF587BE7ETH6 402 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 FAAHO00519 579 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 GPRIN2O60269 458 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 PGRP06401 933 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 CHRM4P08173 479 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 CRATP43155 626 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 PDLIM4P50479 330 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 EFNA4P52798 201 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 LOXL1Q08397 574 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-231ENST00000639599 EPS8Q12929 822 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 SLC17A1Q14916 467 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 LARS2Q15031 903 aaKnown RBP12.88□□□□□ -0.35
TARDBP-231ENST00000639599 TSPO2Q5TGU0 170 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 C11orf71Q6IPW1 123 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 B3GLCTQ6Y288 498 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 DNM1P46Q6ZS02 220 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 SLC46A3Q7Z3Q1 461 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 ANKRD42Q8N9B4 389 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 OR10H5Q8NGA6 315 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 OR9K2Q8NGE7 335 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 TMEM45BQ96B21 275 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 FBXO17Q96EF6 278 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 PIMREGQ9BSJ6 248 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 SLC38A1Q9H2H9 487 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 RMND5AQ9H871 391 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 OBP2BQ9NPH6 170 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 TMEM45AQ9NWC5 275 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 ZNF232Q9UNY5 417 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 ROS1P08922 2347 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 CSPG4Q6UVK1 2322 aa12.88□□□□□ -0.35
TARDBP-231ENST00000639599 NSD1Q96L73 2696 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-231ENST00000639599 OR6C65A6NJZ3 312 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 ATP6V1G2-DDX39BF2Z307 99 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 AKR7A3O95154 331 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 GSNP06396 782 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-231ENST00000639599 THBS1P07996 1170 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 FAM157CP0CG43 387 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 IMPDH2P12268 514 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 ZNF16P17020 682 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-231ENST00000639599 HNF1AP20823 631 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 USF1P22415 310 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-231ENST00000639599 PAX7P23759 505 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 CRISP3P54108 245 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 FOXG1P55316 489 aaPredicted RBP12.87□□□□□ -0.35
TARDBP-231ENST00000639599 UFM1P61960 85 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 H3F3AP84243 136 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 VLDLRP98155 873 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 ZSWIM7Q19AV6 140 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
TARDBP-231ENST00000639599 WBP2NLQ6ICG8 309 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms