RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 RAD51DO75771 328 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 PGM3O95394 542 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 IMPDH2P12268 514 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 H3F3AP84243 136 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 BSPH1Q075Z2 132 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 FAPQ12884 760 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 KLHL17Q6TDP4 642 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 KRT73Q86Y46 540 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 GTPBP3Q969Y2 492 aaKnown RBP16.74■□□□□ 0.27
CLN6-221ENST00000637494 SPDL1Q96EA4 605 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 RABEP2Q9H5N1 569 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 FAIMQ9NVQ4 179 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 TMEM45AQ9NWC5 275 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 RPS6KB2Q9UBS0 482 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 CORO2BQ9UQ03 480 aa16.74■□□□□ 0.27
CLN6-221ENST00000637494 RAI1Q7Z5J4 1906 aaPredicted RBP16.74■□□□□ 0.27
CLN6-221ENST00000637494 ZC3H12DA2A288 527 aaKnown RBP16.73■□□□□ 0.27
CLN6-221ENST00000637494 PAX1P15863 534 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 EDNRAP25101 427 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 ACAA2P42765 397 aaKnown RBP16.73■□□□□ 0.27
CLN6-221ENST00000637494 ATP5J2P56134 94 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 TGFBR3Q03167 851 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 CEACAM7Q14002 265 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 OR7A5Q15622 319 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 ZNF672Q499Z4 452 aaPredicted RBP16.73■□□□□ 0.27
CLN6-221ENST00000637494 TTMPQ5BVD1 217 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 TMEM225Q6GV28 225 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 BLOC1S3Q6QNY0 202 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 TMEM108Q6UXF1 575 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 CLEC9AQ6UXN8 241 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 CLIP4Q8N3C7 705 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 SMAP2Q8WU79 429 aaPredicted RBP16.73■□□□□ 0.27
CLN6-221ENST00000637494 SLC35B4Q969S0 331 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 RADILQ96JH8 1075 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 EBF4Q9BQW3 602 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 SPATA5L1Q9BVQ7 753 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 SF3B5Q9BWJ5 86 aaKnown RBP16.73■□□□□ 0.27
CLN6-221ENST00000637494 ALG2Q9H553 416 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 BCL2L10Q9HD36 194 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 MALT1Q9UDY8 824 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 MGAT4BQ9UQ53 548 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 FLVCR1Q9Y5Y0 555 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 DSCAMO60469 2012 aa16.73■□□□□ 0.27
CLN6-221ENST00000637494 C2CD3Q4AC94 2353 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 LIPT2A6NK58 231 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 EVPLLA8MZ36 301 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 ETS2P15036 469 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 GTF2E2P29084 291 aaKnown RBP16.72■□□□□ 0.27
CLN6-221ENST00000637494 ATP4BP51164 291 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 SQLEQ14534 574 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 SLC17A1Q14916 467 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 AGKQ53H12 422 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 LRIF1Q5T3J3 769 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 GCNT6Q5T4J0 391 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 ABHD12BQ7Z5M8 362 aaPredicted RBP16.72■□□□□ 0.27
CLN6-221ENST00000637494 DEPDC4Q8N2C3 294 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 PIF1Q9H611 641 aa16.72■□□□□ 0.27
CLN6-221ENST00000637494 ZNF701Q9NV72 531 aaPredicted RBP16.72■□□□□ 0.27
CLN6-221ENST00000637494 DPRXA6NFQ7 191 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 H7C1Q1 480 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 RAMP1O60894 148 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 KRT33AO76009 404 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 AKR7A3O95154 331 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 VAMP5O95183 116 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 AHSA1O95433 338 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 NUDT7P0C024 238 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 BMP2P12643 396 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 C1orf140Q5VVS0 124 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 AAED1Q7RTV5 226 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 SERPINA11Q86U17 422 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 GPAT4Q86UL3 456 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 TMEM99Q8N816 258 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 KBTBD8Q8NFY9 601 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 OR52N5Q8NH56 324 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 IGFBPL1Q8WX77 278 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 MAL2Q969L2 176 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 TMEM45BQ96B21 275 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 COX4I2Q96KJ9 171 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 VIPAS39Q9H9C1 493 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 ADPRHL2Q9NX46 363 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.71■□□□□ 0.27
CLN6-221ENST00000637494 DCTN4Q9UJW0 460 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 POU2F3Q9UKI9 436 aa16.71■□□□□ 0.27
CLN6-221ENST00000637494 AQP7P3A6NL99 342 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 ELOA3DA6NLF2 546 aaPredicted RBP16.7■□□□□ 0.26
CLN6-221ENST00000637494 ABCD4O14678 606 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 SMAD7O15105 426 aaKnown RBP16.7■□□□□ 0.26
CLN6-221ENST00000637494 PRG2P13727 222 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 PRKAR1BP31321 381 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 CDH11P55287 796 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 NCALDP61601 193 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 BNIP2Q12982 314 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 ELOA3BQ3SY89 546 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 REEP3Q6NUK4 255 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 KLHL24Q6TFL4 600 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 FUNDC1Q8IVP5 155 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
CLN6-221ENST00000637494 POMGNT2Q8NAT1 580 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 C1orf162Q8NEQ5 155 aaPredicted RBP16.7■□□□□ 0.26
CLN6-221ENST00000637494 ELOA3Q8NG57 546 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms