RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 OR4C6Q8NH72 309 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 C1orf216Q8TAB5 229 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 C6orf106Q9H6K1 298 aaPredicted RBP13.01□□□□□ -0.33
LDB3-209ENST00000623056 MTHFD2LQ9H903 347 aaPredicted RBP13.01□□□□□ -0.33
LDB3-209ENST00000623056 CPNE7Q9UBL6 633 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 SIGLEC7Q9Y286 467 aa13.01□□□□□ -0.33
LDB3-209ENST00000623056 PDE4DIPQ5VU43 2346 aa13□□□□□ -0.33
LDB3-209ENST00000623056 IGKV1-8A0A0C4DH67 115 aa13□□□□□ -0.33
LDB3-209ENST00000623056 UBE2QL1A1L167 161 aa13□□□□□ -0.33
LDB3-209ENST00000623056 F5H5P2 479 aa13□□□□□ -0.33
LDB3-209ENST00000623056 SULT1B1O43704 296 aa13□□□□□ -0.33
LDB3-209ENST00000623056 PPP1R3DO95685 299 aa13□□□□□ -0.33
LDB3-209ENST00000623056 GKN3PP0CG01 181 aa13□□□□□ -0.33
LDB3-209ENST00000623056 NDUFS1P28331 727 aa13□□□□□ -0.33
LDB3-209ENST00000623056 RPS15P62841 145 aaKnown RBP13□□□□□ -0.33
LDB3-209ENST00000623056 EEF1A1P68104 462 aaKnown RBP13□□□□□ -0.33
LDB3-209ENST00000623056 KRT33BQ14525 404 aa13□□□□□ -0.33
LDB3-209ENST00000623056 TMEM35AQ53FP2 167 aa13□□□□□ -0.33
LDB3-209ENST00000623056 PABPC1L2AQ5JQF8 200 aa13□□□□□ -0.33
LDB3-209ENST00000623056 PDSS1Q5T2R2 415 aa13□□□□□ -0.33
LDB3-209ENST00000623056 MRM1Q6IN84 353 aaKnown RBP13□□□□□ -0.33
LDB3-209ENST00000623056 FAM111BQ6SJ93 734 aa13□□□□□ -0.33
LDB3-209ENST00000623056 UNQ9370/PRO34162Q6UXP9 181 aa13□□□□□ -0.33
LDB3-209ENST00000623056 RANBP3LQ86VV4 465 aaPredicted RBP13□□□□□ -0.33
LDB3-209ENST00000623056 RNF113BQ8IZP6 322 aaKnown RBP13□□□□□ -0.33
LDB3-209ENST00000623056 LINC01555Q8NAE3 123 aa13□□□□□ -0.33
LDB3-209ENST00000623056 PXT1Q8NFP0 134 aa13□□□□□ -0.33
LDB3-209ENST00000623056 OR51A7Q8NH64 312 aa13□□□□□ -0.33
LDB3-209ENST00000623056 SYNPRQ8TBG9 265 aa13□□□□□ -0.33
LDB3-209ENST00000623056 BPIFA2Q96DR5 249 aa13□□□□□ -0.33
LDB3-209ENST00000623056 ZMYND19Q96E35 227 aaPredicted RBP13□□□□□ -0.33
LDB3-209ENST00000623056 S100A16Q96FQ6 103 aaKnown RBP13□□□□□ -0.33
LDB3-209ENST00000623056 CACYBPQ9HB71 228 aaKnown RBP13□□□□□ -0.33
LDB3-209ENST00000623056 ZBTB32Q9Y2Y4 487 aaPredicted RBP13□□□□□ -0.33
LDB3-209ENST00000623056 WDR45Q9Y484 360 aa13□□□□□ -0.33
LDB3-209ENST00000623056 SYNDIG1LA6NDD5 238 aa13□□□□□ -0.33
LDB3-209ENST00000623056 GOSR2O14653 212 aa13□□□□□ -0.33
LDB3-209ENST00000623056 LYPD3O95274 346 aa13□□□□□ -0.33
LDB3-209ENST00000623056 EDNRAP25101 427 aa13□□□□□ -0.33
LDB3-209ENST00000623056 HSD17B2P37059 387 aa13□□□□□ -0.33
LDB3-209ENST00000623056 PRMT2P55345 433 aa13□□□□□ -0.33
LDB3-209ENST00000623056 UBE2MP61081 183 aaKnown RBP13□□□□□ -0.33
LDB3-209ENST00000623056 POU4F2Q12837 409 aa13□□□□□ -0.33
LDB3-209ENST00000623056 CBFBQ13951 182 aa13□□□□□ -0.33
LDB3-209ENST00000623056 OR1Q1Q15612 314 aa13□□□□□ -0.33
LDB3-209ENST00000623056 DCAF12L2Q5VW00 463 aa13□□□□□ -0.33
LDB3-209ENST00000623056 SLC36A1Q7Z2H8 476 aa13□□□□□ -0.33
LDB3-209ENST00000623056 AMZ2Q86W34 360 aa13□□□□□ -0.33
LDB3-209ENST00000623056 SYS1Q8N2H4 156 aa13□□□□□ -0.33
LDB3-209ENST00000623056 OR5T2Q8NGG2 359 aa13□□□□□ -0.33
LDB3-209ENST00000623056 OR6K3Q8NGY3 331 aa13□□□□□ -0.33
LDB3-209ENST00000623056 MS4A6EQ96DS6 147 aa13□□□□□ -0.33
LDB3-209ENST00000623056 PRDM7Q9NQW5 492 aa13□□□□□ -0.33
LDB3-209ENST00000623056 WBP1LQ9NX94 342 aa13□□□□□ -0.33
LDB3-209ENST00000623056 GNG8Q9UK08 70 aa13□□□□□ -0.33
LDB3-209ENST00000623056 COL4A6Q14031 1691 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 ACOD1A6NK06 481 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 ACOT7O00154 380 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 CCL5P13501 91 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 CDK2P24941 298 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 MST1P26927 711 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 CERS1P27544 350 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 MPGP29372 298 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 BCL6P41182 706 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 ACTA2P62736 377 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 ACTG2P63267 376 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 MRPS10P82664 201 aaKnown RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 PWWP2BQ6NUJ5 590 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 RPL22L1Q6P5R6 122 aaKnown RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 TMPRSS11FQ6ZWK6 438 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 TMCO2Q7Z6W1 182 aaPredicted RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 IRF7Q92985 503 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 PAWRQ96IZ0 340 aaKnown RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 SEMA4CQ9C0C4 833 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 SLC25A32Q9H2D1 315 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 MRTO4Q9UKD2 239 aaKnown RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 SIGLEC6O43699 453 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 CDC123O75794 336 aaPredicted RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 RPN2P04844 631 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 PSMB10P40306 273 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 NAA10P41227 235 aaPredicted RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 ARHGDIBP52566 201 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 ART1P52961 327 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 ZIC1Q15915 447 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 RPE65Q16518 533 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 SPOUT1Q5T280 376 aaKnown RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 ABHD17CQ6PCB6 329 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 CDK20Q8IZL9 346 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 OR2AK2Q8NG84 335 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 LRIG1Q96JA1 1093 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 ZNF681Q96N22 645 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 NKX6-2Q9C056 277 aaPredicted RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 MFFQ9GZY8 342 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 IFT22Q9H7X7 185 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 TM7SF3Q9NS93 570 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 OR5V1Q9UGF6 321 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 PURGQ9UJV8 347 aaKnown RBP12.99□□□□□ -0.33
LDB3-209ENST00000623056 PLCL2Q9UPR0 1127 aa12.99□□□□□ -0.33
LDB3-209ENST00000623056 A0A1B0GTQ1 180 aa12.98□□□□□ -0.33
LDB3-209ENST00000623056 DUXAA6NLW8 204 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms