RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 KCNRGQ8N5I3 272 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 OR6J1Q8NGC5 347 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 OR5D16Q8NGK9 328 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 IMP4Q96G21 291 aaKnown RBP7.34□□□□□ -1.23
VPS11-209ENST00000622309 CDKN2AIPNLQ96HQ2 116 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 LRIG1Q96JA1 1093 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 HSPA12BQ96MM6 686 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 TGM7Q96PF1 710 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 GAL3ST4Q96RP7 486 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 NRIP2Q9BQI9 281 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 ACBD6Q9BR61 282 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 ULBP1Q9BZM6 244 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 LAT2Q9GZY6 243 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 FBRSQ9HAH7 460 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 RCC2Q9P258 522 aaKnown RBP7.34□□□□□ -1.23
VPS11-209ENST00000622309 FAM96BQ9Y3D0 163 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 PCDHB1Q9Y5F3 818 aa7.34□□□□□ -1.23
VPS11-209ENST00000622309 SERTM2A0A1B0GWG4 89 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 GGT3PA6NGU5 568 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ADAM10O14672 748 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CYTIPO60759 359 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ABLIM3O94929 683 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 OR2F2O95006 317 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 PDYNP01213 254 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 OR12D1P0DN82 309 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 RNH1P13489 461 aaKnown RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 NAE1Q13564 534 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 OR2F1Q13607 317 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ZNF234Q14588 700 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 TGIF1Q15583 401 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 INPP5JQ15735 1006 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 SLC25A35Q3KQZ1 300 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ZNF770Q6IQ21 691 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 COMTD1Q86VU5 262 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 BEST3Q8N1M1 668 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 OR56A3Q8NH54 315 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 RAB24Q969Q5 203 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ISOC2Q96AB3 205 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 FCRL4Q96PJ5 515 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 DUSP15Q9H1R2 295 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 SEC61A2Q9H9S3 476 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 MMP26Q9NRE1 261 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 TAS2R10Q9NYW0 307 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CACNG4Q9UBN1 327 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 GDF2Q9UK05 429 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 SLC27A6Q9Y2P4 619 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 TMEM184BQ9Y519 407 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 MYLKQ15746 1914 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 HSBP1L1C9JCN9 74 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 PMELP40967 661 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 GIPRP48546 466 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CD81P60033 236 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 PJVKQ0ZLH3 352 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 MTAPQ13126 283 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 GAB1Q13480 694 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ARHGEF7Q14155 803 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 RNASE10Q5GAN6 216 aaKnown RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 FBXO47Q5MNV8 452 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 MARC1Q5VT66 337 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 TMEM244Q5VVB8 128 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 NSUN5P2Q63ZY6 315 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 FAAP20Q6NZ36 180 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 GAREM2Q75VX8 874 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CEACAM19Q7Z692 300 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 TAF8Q7Z7C8 310 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 SELENOHQ8IZQ5 122 aaKnown RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 OR10R2Q8NGX6 335 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 SP7Q8TDD2 431 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 FCAMRQ8WWV6 532 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ADIPOR1Q96A54 375 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 SMARCD1Q96GM5 515 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CDCA3Q99618 268 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 WDR13Q9H1Z4 485 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 MGAMO43451 1857 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 DOCK3Q8IZD9 2030 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 YJEFN3A6XGL0 299 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 UPK3BL1B0FP48 263 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 KDM4EB2RXH2 506 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 UPK3BL2E5RIL1 263 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 FAAHO00519 579 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CTDSPLO15194 276 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 UGDHO60701 494 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 CLDN9O95484 217 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 SNAI1O95863 264 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 LRG1P02750 347 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 SFTA3P0C7M3 94 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ACKR3P25106 362 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ADH6P28332 368 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 WNT5AP41221 380 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 LSM6P62312 80 aaKnown RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 ATXN7L3Q14CW9 347 aaPredicted RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 ELAVL1Q15717 326 aaKnown RBP7.33□□□□□ -1.24
VPS11-209ENST00000622309 MPPED2Q15777 294 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 SLC35D3Q5M8T2 416 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 EOGTQ5NDL2 527 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 FAM27D1Q5T7N8 215 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ARMC12Q5T9G4 340 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 ZNF813Q6ZN06 617 aa7.33□□□□□ -1.24
VPS11-209ENST00000622309 C6orf120Q7Z4R8 191 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms