RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 SLC38A4Q969I6 547 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 DDIT4LQ96D03 193 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 CMTM5Q96DZ9 223 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 LRRC46Q96FV0 321 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 DACH2Q96NX9 599 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 CCT8L2Q96SF2 557 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 ECSITQ9BQ95 431 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 ZNF559Q9BR84 538 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 ZNF426Q9BUY5 554 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 PTDSS2Q9BVG9 487 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 RBM24Q9BX46 236 aaKnown RBP7.34□□□□□ -1.23
NEK3-209ENST00000618856 PRRG4Q9BZD6 226 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 OPN3Q9H1Y3 402 aaPredicted RBP7.34□□□□□ -1.23
NEK3-209ENST00000618856 OR10A4Q9H209 315 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 PIF1Q9H611 641 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 CACYBPQ9HB71 228 aaKnown RBP7.34□□□□□ -1.23
NEK3-209ENST00000618856 MCCC2Q9HCC0 563 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 CRIM1Q9NZV1 1036 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 KLHL9Q9P2J3 617 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 CLEC4AQ9UMR7 237 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 PROCRQ9UNN8 238 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 USP22Q9UPT9 525 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 ARL2BPQ9Y2Y0 163 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 EMC9Q9Y3B6 208 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 POLQO75417 2590 aa7.34□□□□□ -1.23
NEK3-209ENST00000618856 A0A087WUJ7 227 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 IGHV3-15A0A0B4J1V0 119 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 CCT8L1PA6NM43 557 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 EEF1E1-BLOC1S5C9J1V9 151 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 NME4O00746 187 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 AIM2O14862 343 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 EEF1E1O43324 174 aaKnown RBP7.33□□□□□ -1.24
NEK3-209ENST00000618856 RAMP1O60894 148 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 CTAG2O75638 210 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 CNOT4O95628 575 aaKnown RBP7.33□□□□□ -1.24
NEK3-209ENST00000618856 FAM107AO95990 144 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 PNMTP11086 282 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 EPXP11678 715 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 PSMB1P20618 241 aaKnown RBP7.33□□□□□ -1.24
NEK3-209ENST00000618856 CXCR1P25024 350 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 UQCRC1P31930 480 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 KDELR2P33947 212 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 IDUAP35475 653 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 UGT2B10P36537 528 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 KIR2DL3P43628 341 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 OR3A2P47893 321 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 SIRPAP78324 504 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 FAM27E3Q08E93 113 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 SLC17A1Q14916 467 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 OR1Q1Q15612 314 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 ZNF613Q6PF04 617 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 ULK3Q6PHR2 472 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 C5orf46Q6UWT4 87 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 NHLRC1Q6VVB1 395 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 NUFIP2Q7Z417 695 aaKnown RBP7.33□□□□□ -1.24
NEK3-209ENST00000618856 LUZP2Q86TE4 346 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 LSRQ86X29 649 aaPredicted RBP7.33□□□□□ -1.24
NEK3-209ENST00000618856 MICU2Q8IYU8 434 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 CADM2Q8N3J6 435 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 SMYD1Q8NB12 490 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 OR2T12Q8NG77 320 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 OR52E4Q8NGH9 312 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 OR6T1Q8NGN1 323 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 MFSD8Q8NHS3 518 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 SF3B5Q9BWJ5 86 aaKnown RBP7.33□□□□□ -1.24
NEK3-209ENST00000618856 PRR14Q9BWN1 585 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 KLHL28Q9NXS3 571 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 TESMINQ9Y4I5 508 aa7.33□□□□□ -1.24
NEK3-209ENST00000618856 VPS13CQ709C8 3753 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 LOC102725191A0A1B0GVB3 256 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 ELOVL7A1L3X0 281 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 AQP7P3A6NL99 342 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 M0R3H8 397 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 NDUFAB1O14561 156 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 PLGP00747 810 aaPredicted RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 OPN1SWP03999 348 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 GPIP06744 558 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 TFPIP10646 304 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 CCNA2P20248 432 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 FPR1P21462 350 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 EDNRAP25101 427 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 GSK3BP49841 420 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 SLC7A2P52569 658 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 CDH12P55289 794 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 CTBP2P56545 445 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 RGS8P57771 180 aaPredicted RBP7.32□□□□□ -1.24
NEK3-209ENST00000618856 KRTAP10-9P60411 292 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 PSME3P61289 254 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 SELENOWP63302 87 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 LIPEQ05469 1076 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 RASGEF1BQ0VAM2 473 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 BNIP2Q12982 314 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 CEACAM7Q14002 265 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 KRT72Q14CN4 511 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 POU4F3Q15319 338 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 ALG10BQ5I7T1 473 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 TMEM201Q5SNT2 666 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 C1orf140Q5VVS0 124 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 STAC2Q6ZMT1 411 aa7.32□□□□□ -1.24
NEK3-209ENST00000618856 BEND4Q6ZU67 534 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms