RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PRR5P85299 388 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 HFEQ30201 348 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 CDK20Q8IZL9 346 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 BVESQ8NE79 360 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 OR4D10Q8NGI6 311 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 STK35Q8TDR2 534 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 SLC25A28Q96A46 364 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 C3orf49Q96BT1 292 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 TCEAL4Q96EI5 215 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 PTCHD1Q96NR3 888 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 ZMAT3Q9HA38 289 aaKnown RBP12.16□□□□□ -0.46
MSH6-214ENST00000616033 GPN1Q9HCN4 374 aaPredicted RBP12.16□□□□□ -0.46
MSH6-214ENST00000616033 KLHL9Q9P2J3 617 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 KCNK6Q9Y257 313 aa12.16□□□□□ -0.46
MSH6-214ENST00000616033 EXOGQ9Y2C4 368 aaKnown RBP12.16□□□□□ -0.46
MSH6-214ENST00000616033 OR52A4PA6NMU1 304 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 PEX12O00623 359 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 CCSO14618 274 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 BET1O15155 118 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 AIFM1O95831 613 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 FPR3P25089 353 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 H2BFSP57053 126 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 ZNF85Q03923 595 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 RNF44Q7L0R7 432 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 GID4Q8IVV7 300 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 KLHDC8AQ8IYD2 350 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 HAVCR2Q8TDQ0 301 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 SMIM4Q8WVI0 70 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 CPNE2Q96FN4 548 aaPredicted RBP12.15□□□□□ -0.46
MSH6-214ENST00000616033 IGSF21Q96ID5 467 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 HS6ST2Q96MM7 605 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 ZNF230Q9UIE0 474 aaPredicted RBP12.15□□□□□ -0.46
MSH6-214ENST00000616033 CAMK2AQ9UQM7 478 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 SZT2Q5T011 3432 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 SNRNP200O75643 2136 aaKnown RBP12.15□□□□□ -0.46
MSH6-214ENST00000616033 CEP290O15078 2479 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 PLSCR5A0PG75 271 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 C4orf51C9J302 202 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 GPR31O00270 319 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 ACRP10323 421 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 IL9P15248 144 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 CSNK2A2P19784 350 aaPredicted RBP12.15□□□□□ -0.46
MSH6-214ENST00000616033 BTN3A2P78410 334 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 PLA2G7Q13093 441 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 OR7E24Q6IFN5 339 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 MBOAT2Q6ZWT7 520 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 AMZ2Q86W34 360 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 TMPRSS12Q86WS5 348 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 ACOT4Q8N9L9 421 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 OVCA2Q8WZ82 227 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 SLC35A4Q96G79 324 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 ZNF578Q96N58 590 aaPredicted RBP12.15□□□□□ -0.46
MSH6-214ENST00000616033 ZNF471Q9BX82 626 aaPredicted RBP12.15□□□□□ -0.46
MSH6-214ENST00000616033 CHST6Q9GZX3 395 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 TMEM231Q9H6L2 316 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 IL21Q9HBE4 155 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 PTTG3PQ9NZH4 202 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 KIF25Q9UIL4 384 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 MYO15AQ9UKN7 3530 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 MOKQ9UQ07 419 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 ADAM18Q9Y3Q7 739 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 HCFC2Q9Y5Z7 792 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 DISC1C4P0D8 188 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 ZIC2O95409 532 aaPredicted RBP12.15□□□□□ -0.46
MSH6-214ENST00000616033 CTSAP10619 480 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 CDK2P24941 298 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 TAF13Q15543 124 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 PDSS1Q5T2R2 415 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 FAM111BQ6SJ93 734 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 SCARB1Q8WTV0 552 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 NUS1Q96E22 293 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 TSNAXQ99598 290 aaKnown RBP12.15□□□□□ -0.46
MSH6-214ENST00000616033 PDCD10Q9BUL8 212 aa12.15□□□□□ -0.46
MSH6-214ENST00000616033 D6RAR5 112 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 DOK2O60496 412 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 SELENOFO60613 162 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 F3P13726 295 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 SEZ6L2Q6UXD5 910 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 BPIFA2Q96DR5 249 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 C1QTNF2Q9BXJ5 285 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 CPEB1Q9BZB8 566 aaKnown RBP12.14□□□□□ -0.47
MSH6-214ENST00000616033 ZNF780BQ9Y6R6 833 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 PVALBP20472 110 aaPredicted RBP12.14□□□□□ -0.47
MSH6-214ENST00000616033 MAPK14Q16539 360 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 BRIX1Q8TDN6 353 aaKnown RBP12.14□□□□□ -0.47
MSH6-214ENST00000616033 TMEM239Q8WW34 195 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 S100A16Q96FQ6 103 aaKnown RBP12.14□□□□□ -0.47
MSH6-214ENST00000616033 PGLYRP3Q96LB9 341 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 ZNF75AQ96N20 296 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 FOXN4Q96NZ1 517 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 DPYSL5Q9BPU6 564 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 ULBP3Q9BZM4 244 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 LDAHQ9H6V9 325 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 CDV3Q9UKY7 258 aaKnown RBP12.14□□□□□ -0.47
MSH6-214ENST00000616033 OR1A2Q9Y585 309 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 MAN2B1O00754 1011 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 ARL6IP5O75915 188 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 ITPKBP27987 946 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 WASP42768 502 aa12.14□□□□□ -0.47
MSH6-214ENST00000616033 FXYD6P3P58550 94 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms