RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 EGR4Q05215 589 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 DMTNQ08495 405 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 CYLC2Q14093 348 aaPredicted RBP12.7□□□□□ -0.38
PRDM16-210ENST00000607632 CAPRIN1Q14444 709 aaKnown RBP12.7□□□□□ -0.38
PRDM16-210ENST00000607632 SLC17A1Q14916 467 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 P2RY6Q15077 328 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 EXOC3L2Q2M3D2 409 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 SFRP5Q5T4F7 317 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 CCDC80Q76M96 950 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 GALNT5Q7Z7M9 940 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 CADM2Q8N3J6 435 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 USB1Q9BQ65 265 aaKnown RBP12.7□□□□□ -0.38
PRDM16-210ENST00000607632 MED18Q9BUE0 208 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 HDHD5Q9BXW7 423 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 PIF1Q9H611 641 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 EMC3Q9P0I2 261 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 TESQ9UGI8 421 aaKnown RBP12.7□□□□□ -0.38
PRDM16-210ENST00000607632 CAPN7Q9Y6W3 813 aa12.7□□□□□ -0.38
PRDM16-210ENST00000607632 FTCDNL1E5RQL4 147 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 MRASO14807 208 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 CASKO14936 926 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 TPST2O60704 377 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 LGI1O95970 557 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 GPIP06744 558 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 CRYBA2P53672 197 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 HOXC5Q00444 222 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 NRF1Q16656 503 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 DUSP7Q16829 419 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 CYP51A1Q16850 503 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 VMACQ2NL98 169 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 FAM91A1Q658Y4 838 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 LSRQ86X29 649 aaPredicted RBP12.69□□□□□ -0.38
PRDM16-210ENST00000607632 SNX32Q86XE0 403 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 ARMC8Q8IUR7 673 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 CCDC103Q8IW40 242 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 STEAP2Q8NFT2 490 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 GPR32P1Q8NGA4 272 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 OR10A6Q8NH74 314 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 NRGNQ92686 78 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 ARHGDIGQ99819 225 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 SH3GL1Q99961 368 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 WFDC6Q9BQY6 131 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 NAA11Q9BSU3 229 aaPredicted RBP12.69□□□□□ -0.38
PRDM16-210ENST00000607632 PTDSS2Q9BVG9 487 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 SF3B5Q9BWJ5 86 aaKnown RBP12.69□□□□□ -0.38
PRDM16-210ENST00000607632 TRIM2Q9C040 744 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 KLHL4Q9C0H6 718 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 ACTR6Q9GZN1 396 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 LIME1Q9H400 295 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 PRSS50Q9UI38 385 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 ST6GALNAC2Q9UJ37 374 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 FLVCR1Q9Y5Y0 555 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 AKAP6Q13023 2319 aa12.69□□□□□ -0.38
PRDM16-210ENST00000607632 A0A1B0GWA3 101 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 AQP7P3A6NL99 342 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 M0QX08 132 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 KLF4O43474 513 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 FMO6PO60774 539 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 CD247P20963 164 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 AQP1P29972 269 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 SF3A3Q12874 501 aaKnown RBP eCLIP12.68□□□□□ -0.38
PRDM16-210ENST00000607632 BNIP2Q12982 314 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 ITGADQ13349 1161 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 CEACAM7Q14002 265 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 VEZF1Q14119 521 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 INTS11Q5TA45 600 aaKnown RBP12.68□□□□□ -0.38
PRDM16-210ENST00000607632 C1orf140Q5VVS0 124 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 C5orf46Q6UWT4 87 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 SEZ6L2Q6UXD5 910 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 PAMR1Q6UXH9 720 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 PATL1Q86TB9 770 aaKnown RBP12.68□□□□□ -0.38
PRDM16-210ENST00000607632 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
PRDM16-210ENST00000607632 PCYOX1LQ8NBM8 494 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 MFSD8Q8NHS3 518 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 RP9Q8TA86 221 aaKnown RBP12.68□□□□□ -0.38
PRDM16-210ENST00000607632 DNAJA4Q8WW22 397 aaPredicted RBP12.68□□□□□ -0.38
PRDM16-210ENST00000607632 SLC38A4Q969I6 547 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 TMEM45BQ96B21 275 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 MBD6Q96DN6 1003 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 DNAJA3Q96EY1 480 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 CXXC4Q9H2H0 198 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 MALT1Q9UDY8 824 aa12.68□□□□□ -0.38
PRDM16-210ENST00000607632 IGKV1D-42A0A075B6H8 117 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 A0A0B4J2E0 115 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 A0A1B0GX12 115 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 PDLIM1O00151 329 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 CCDC22O60826 627 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 ADAP00813 363 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 PNMTP11086 282 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 IST1P53990 364 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 RGS8P57771 180 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-210ENST00000607632 POU4F3Q15319 338 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 MMEL1Q495T6 779 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 OTUD3Q5T2D3 398 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-210ENST00000607632 SWT1Q5T5J6 900 aaKnown RBP12.67□□□□□ -0.38
PRDM16-210ENST00000607632 FBXW9Q5XUX1 488 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 ANKRD34AQ69YU3 496 aa12.67□□□□□ -0.38
PRDM16-210ENST00000607632 C8orf82Q6P1X6 216 aaPredicted RBP12.67□□□□□ -0.38
PRDM16-210ENST00000607632 ULK3Q6PHR2 472 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms