RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 ULK3Q6PHR2 472 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 RBM45Q8IUH3 476 aaKnown RBP12.67□□□□□ -0.38
TUBE1-211ENST00000605457 MCEMP1Q8IX19 187 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 ELOA3Q8NG57 546 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 OR6K3Q8NGY3 331 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 VANGL1Q8TAA9 524 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-211ENST00000605457 STK35Q8TDR2 534 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 PROX1Q92786 737 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 SLC38A4Q969I6 547 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 LRRC46Q96FV0 321 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 MCHR1Q99705 422 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 PSD2Q9BQI7 771 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 PCDHAC1Q9H158 963 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 TMEM27Q9HBJ8 222 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 KLHL13Q9P2N7 655 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 FOXD3Q9UJU5 478 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-211ENST00000605457 ING1Q9UK53 422 aaPredicted RBP12.67□□□□□ -0.38
TUBE1-211ENST00000605457 SLC9A8Q9Y2E8 581 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 LRBAP50851 2863 aa12.67□□□□□ -0.38
TUBE1-211ENST00000605457 LIPT2A6NK58 231 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 A8MXE2 369 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 CXCR6O00574 342 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 HNRNPRO43390 633 aaKnown RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 SMNDC1O75940 238 aaKnown RBP eCLIP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 PNMTP11086 282 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 COX6B1P14854 86 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 UQCRC1P31930 480 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 IDUAP35475 653 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 CTBP2P56545 445 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 OR2B6P58173 313 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 SLC35A1P78382 337 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 SLC25A3Q00325 362 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 ENTPD8Q5MY95 495 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 SWT1Q5T5J6 900 aaKnown RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 C1orf140Q5VVS0 124 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 ZNF613Q6PF04 617 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 MEX3BQ6ZN04 569 aaKnown RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 TSPYL5Q86VY4 417 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 DMRTC2Q8IXT2 367 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 ZHX1-C8orf76Q96EF9 292 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 SLC47A1Q96FL8 570 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 OPN3Q9H1Y3 402 aaPredicted RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 BCO1Q9HAY6 547 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 GALNT8Q9NY28 637 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 ADA2Q9NZK5 511 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 KLHL9Q9P2J3 617 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 SH3GLB1Q9Y371 365 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 ALPK2Q86TB3 2170 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 IGKV1D-42A0A075B6H8 117 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 A0A087WUJ7 227 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 CPSF4LA6NMK7 179 aaKnown RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 ZNF814B7Z6K7 855 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 GPIP06744 558 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 TNFRSF1BP20333 461 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 FPR1P21462 350 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 MNAT1P51948 309 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 CDH12P55289 794 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 SELENOWP63302 87 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 RASGEF1BQ0VAM2 473 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 CEACAM7Q14002 265 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 CARM1Q86X55 608 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 TUSC5Q8IXB3 177 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 ADAMTS16Q8TE57 1224 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 PTDSS2Q9BVG9 487 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 RBM24Q9BX46 236 aaKnown RBP12.66□□□□□ -0.38
TUBE1-211ENST00000605457 PLSCR4Q9NRQ2 329 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 NDE1Q9NXR1 346 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 PROCRQ9UNN8 238 aa12.66□□□□□ -0.38
TUBE1-211ENST00000605457 CSMD2Q7Z408 3487 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 IGKV3D-15A0A087WSY6 115 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 ZNF716A6NP11 495 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 GSTA4O15217 222 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 CHP2O43745 196 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 EIF1BO60739 113 aaKnown RBP12.65□□□□□ -0.38
TUBE1-211ENST00000605457 RAMP1O60894 148 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 AHSA1O95433 338 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 YES1P07947 543 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 GGT1P19440 569 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 CPOXP36551 454 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 MXRA7P84157 204 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 OR7A5Q15622 319 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 TMEM201Q5SNT2 666 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 ZNF474Q6S9Z5 364 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-211ENST00000605457 PAQR6Q6TCH4 344 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 C5orf46Q6UWT4 87 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 C16orf89Q6UX73 402 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 DEFB107AQ8IZN7 70 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 RNF148Q8N7C7 305 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 PIGXQ8TBF5 258 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 NSL1Q96IY1 281 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 TPD52L3Q96J77 140 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 ZNF300Q96RE9 604 aaPredicted RBP12.65□□□□□ -0.38
TUBE1-211ENST00000605457 SELENONQ9NZV5 590 aa12.65□□□□□ -0.38
TUBE1-211ENST00000605457 ZNF724A8MTY0 619 aa12.64□□□□□ -0.39
TUBE1-211ENST00000605457 FTCDNL1E5RQL4 147 aa12.64□□□□□ -0.39
TUBE1-211ENST00000605457 FZD7O75084 574 aa12.64□□□□□ -0.39
TUBE1-211ENST00000605457 LYPD3O95274 346 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms