RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 EXOC3L2Q2M3D2 409 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 SWT1Q5T5J6 900 aaKnown RBP17.08■□□□□ 0.32
SRSF4-206ENST00000605204 FAM91A1Q658Y4 838 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 STAC2Q6ZMT1 411 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 SSX8Q7RTT4 187 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 SPATA21Q7Z572 469 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 ATG4DQ86TL0 474 aaPredicted RBP17.08■□□□□ 0.32
SRSF4-206ENST00000605204 RANBP3LQ86VV4 465 aaPredicted RBP17.08■□□□□ 0.32
SRSF4-206ENST00000605204 STEAP2Q8NFT2 490 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 OR10A6Q8NH74 314 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 ECSITQ9BQ95 431 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 GPATCH1Q9BRR8 931 aaKnown RBP17.08■□□□□ 0.32
SRSF4-206ENST00000605204 TAPBPLQ9BX59 468 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 PIF1Q9H611 641 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 SELENONQ9NZV5 590 aa17.08■□□□□ 0.32
SRSF4-206ENST00000605204 ING1Q9UK53 422 aaPredicted RBP17.08■□□□□ 0.32
SRSF4-206ENST00000605204 HEATR5AQ86XA9 2040 aa17.07■□□□□ 0.32
SRSF4-206ENST00000605204 TMEM229AB2RXF0 380 aa17.07■□□□□ 0.32
SRSF4-206ENST00000605204 FMO6PO60774 539 aa17.07■□□□□ 0.32
SRSF4-206ENST00000605204 SELPLGQ14242 412 aa17.07■□□□□ 0.32
SRSF4-206ENST00000605204 VMACQ2NL98 169 aa17.07■□□□□ 0.32
SRSF4-206ENST00000605204 GABRG1Q8N1C3 465 aa17.07■□□□□ 0.32
SRSF4-206ENST00000605204 OR52E4Q8NGH9 312 aa17.07■□□□□ 0.32
SRSF4-206ENST00000605204 KLHL4Q9C0H6 718 aa17.07■□□□□ 0.32
SRSF4-206ENST00000605204 SPG11Q96JI7 2443 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 LIPT2A6NK58 231 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 ELOA3DA6NLF2 546 aaPredicted RBP17.06■□□□□ 0.32
SRSF4-206ENST00000605204 ZNF716A6NP11 495 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 NPIPB7O75200 414 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 AHSA1O95433 338 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 FPR1P21462 350 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 SF3A3Q12874 501 aaKnown RBP eCLIP17.06■□□□□ 0.324e-6■■□□□ 11.7
SRSF4-206ENST00000605204 VEZF1Q14119 521 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 ELOA3BQ3SY89 546 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 ULK3Q6PHR2 472 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 Q6ZT83 130 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 CCDC80Q76M96 950 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 NUFIP2Q7Z417 695 aaKnown RBP17.06■□□□□ 0.32
SRSF4-206ENST00000605204 ELOA3Q8NG57 546 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 NINJ1Q92982 152 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 SF3B5Q9BWJ5 86 aaKnown RBP17.06■□□□□ 0.32
SRSF4-206ENST00000605204 TMEM27Q9HBJ8 222 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 SLC9A8Q9Y2E8 581 aa17.06■□□□□ 0.32
SRSF4-206ENST00000605204 LOC100653049A0A140TA62 436 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 ZC3H12DA2A288 527 aaKnown RBP17.05■□□□□ 0.32
SRSF4-206ENST00000605204 DYNC1I1O14576 645 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 FRS3O43559 492 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 OR2T1O43869 369 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 KRT34O76011 436 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 VAMP5O95183 116 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 IFNA14P01570 189 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 IMPDH2P12268 514 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 CRYGSP22914 178 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 LSP1P33241 339 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 ALG10BQ5I7T1 473 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 C1orf140Q5VVS0 124 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 SPNS3Q6ZMD2 512 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 CALHM3Q86XJ0 350 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 ZNF100Q8IYN0 542 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 SLC47A1Q96FL8 570 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 WFIKKN1Q96NZ8 548 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 ZNF300Q96RE9 604 aaPredicted RBP17.05■□□□□ 0.32
SRSF4-206ENST00000605204 PARPBPQ9NWS1 579 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 ARMCX1Q9P291 453 aa17.05■□□□□ 0.32
SRSF4-206ENST00000605204 NOSIPQ9Y314 301 aaKnown RBP17.05■□□□□ 0.32
SRSF4-206ENST00000605204 A0A1B0GWA3 101 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 M0QX08 132 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 NDUFAB1O14561 156 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 TPST1O60507 370 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 GCM2O75603 506 aaPredicted RBP17.04■□□□□ 0.32
SRSF4-206ENST00000605204 LGI1O95970 557 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 HRGP04196 525 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 IL32P24001 234 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 GZMMP51124 257 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 DMTNQ08495 405 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 ITGADQ13349 1161 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 CEACAM7Q14002 265 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 RABL3Q5HYI8 236 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 OTUD3Q5T2D3 398 aaPredicted RBP17.04■□□□□ 0.32
SRSF4-206ENST00000605204 CDC20BQ86Y33 519 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 MFSD8Q8NHS3 518 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 SLC26A7Q8TE54 656 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 KISS1RQ969F8 398 aaPredicted RBP17.04■□□□□ 0.32
SRSF4-206ENST00000605204 APH1AQ96BI3 265 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 ACTR6Q9GZN1 396 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 ITPR3Q14573 2671 aa17.04■□□□□ 0.32
SRSF4-206ENST00000605204 GMNCA6NCL1 334 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 AQP7P3A6NL99 342 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 FZD7O75084 574 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 HTR2AP28223 471 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 GTF2E2P29084 291 aaKnown RBP17.03■□□□□ 0.32
SRSF4-206ENST00000605204 SLC17A1Q14916 467 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 MFSD13AQ14CX5 517 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 OR7A5Q15622 319 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 GLIPR1L2Q4G1C9 344 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 SFRP5Q5T4F7 317 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 ZNF613Q6PF04 617 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 CPLX4Q7Z7G2 160 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 OR6S1Q8NH40 331 aa17.03■□□□□ 0.32
SRSF4-206ENST00000605204 SLC38A4Q969I6 547 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms