RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 TRAV27A0A087WT01 109 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 ZIC3O60481 467 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 TFPIP10646 304 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 MEOX1P50221 254 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 PLGLB1Q02325 96 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 GINS1Q14691 196 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 TMEM236Q5W0B7 351 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 SLC27A4Q6P1M0 643 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 BORAQ6PGQ7 559 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 CASP12Q6UXS9 341 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 SLC43A2Q8N370 569 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 ATP6V1C2Q8NEY4 427 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 OR5M1Q8NGP8 315 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 OR6S1Q8NH40 331 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 OR51A7Q8NH64 312 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 TSSK6Q9BXA6 273 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 TTTY12Q9BZ98 90 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 PRRG3Q9BZD7 231 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 OR11A1Q9GZK7 315 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 ZNF703Q9H7S9 590 aaPredicted RBP20.4■□□□□ 0.86
IRF3-228ENST00000601291 SLC25A19Q9HC21 320 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 IMPAD1Q9NX62 359 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 EML6Q6ZMW3 1958 aa20.4■□□□□ 0.86
IRF3-228ENST00000601291 TRAV17A0A0B4J275 112 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 LRRN3E7EW58 273 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 BGLAPP02818 100 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 HIST1H2ABP04908 130 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 RFPL3SP0C7P2 107 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 GIPRP48546 466 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 TMEM44Q2T9K0 475 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 ANKDD1AQ495B1 522 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 SYT14P1Q58G82 188 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 CLEC12AQ5QGZ9 265 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 HIST3H2AQ7L7L0 130 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 MAMDC2Q7Z304 686 aaPredicted RBP20.39■□□□□ 0.85
IRF3-228ENST00000601291 ZADH2Q8N4Q0 377 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 OR2T33Q8NG76 320 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 OR8D4Q8NGM9 314 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 HIST1H2ACQ93077 130 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 SAMD8Q96LT4 415 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 MOGAT1Q96PD6 335 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 PTDSS2Q9BVG9 487 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 POTEKPQ9BYX7 375 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 OR2B2Q9GZK3 357 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 NDEL1Q9GZM8 345 aa20.39■□□□□ 0.85
IRF3-228ENST00000601291 H3BML4 177 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 PTP4A3O75365 173 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 TRAPPC6AO75865 159 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 IL11P20809 199 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 CLK1P49759 484 aaKnown RBP20.38■□□□□ 0.85
IRF3-228ENST00000601291 PRPS1P60891 318 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 CDK5Q00535 292 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 MFSD13AQ14CX5 517 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 NANOGNBQ7Z5D8 188 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 LRRC17Q8N6Y2 441 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 FAM98AQ8NCA5 519 aaKnown RBP20.38■□□□□ 0.85
IRF3-228ENST00000601291 FAM83FQ8NEG4 500 aaPredicted RBP20.38■□□□□ 0.85
IRF3-228ENST00000601291 TNFRSF13CQ96RJ3 184 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 ADNPQ9H2P0 1102 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 OR2M5A3KFT3 312 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 EFNA2O43921 213 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 NDUFB2O95178 105 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 ASAH2BP0C7U1 165 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 PEPDP12955 493 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 SLC6A6P31641 620 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 IDUAP35475 653 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 CHN2P52757 468 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 ISL1P61371 349 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 FOXK1P85037 733 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 C1QL3Q5VWW1 255 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 C12orf73Q69YU5 71 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 IGFL3Q6UXB1 125 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 IQCF1Q8N6M8 205 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 ZFP62Q8NB50 900 aaPredicted RBP20.38■□□□□ 0.85
IRF3-228ENST00000601291 SLC25A36Q96CQ1 311 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 TAPBPLQ9BX59 468 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 MCCC2Q9HCC0 563 aa20.38■□□□□ 0.85
IRF3-228ENST00000601291 MKRN2OSH3BPM6 223 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 ACOT7O00154 380 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 MPZL2O60487 215 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 RPSAP08865 295 aaKnown RBP20.37■□□□□ 0.85
IRF3-228ENST00000601291 GTF2E2P29084 291 aaKnown RBP20.37■□□□□ 0.85
IRF3-228ENST00000601291 FXYD6P3P58550 94 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 RPS4XP62701 263 aaKnown RBP20.37■□□□□ 0.85
IRF3-228ENST00000601291 LTBQ06643 244 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 UGT2A3Q6UWM9 527 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 YRDCQ86U90 279 aaKnown RBP20.37■□□□□ 0.85
IRF3-228ENST00000601291 SLC22A16Q86VW1 577 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 CCDC71Q8IV32 467 aaPredicted RBP20.37■□□□□ 0.85
IRF3-228ENST00000601291 MFSD8Q8NHS3 518 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 SLC38A2Q96QD8 506 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 UBL7Q96S82 380 aaPredicted RBP20.37■□□□□ 0.85
IRF3-228ENST00000601291 ASPNQ9BXN1 380 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 PCNX3Q9H6A9 2034 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 TMEM185BQ9H7F4 350 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 IL20RAQ9UHF4 553 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 HIF3AQ9Y2N7 669 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 CSAG2Q9Y5P2 127 aa20.37■□□□□ 0.85
IRF3-228ENST00000601291 GJE1A6NN92 205 aa20.36■□□□□ 0.85
IRF3-228ENST00000601291 HPNP05981 417 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms