RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 POTEKPQ9BYX7 375 aa13.54□□□□□ -0.24
LIG1-219ENST00000600055 TMEM27Q9HBJ8 222 aa13.54□□□□□ -0.24
LIG1-219ENST00000600055 CRIM1Q9NZV1 1036 aa13.54□□□□□ -0.24
LIG1-219ENST00000600055 KLHL9Q9P2J3 617 aa13.54□□□□□ -0.24
LIG1-219ENST00000600055 AP3M1Q9Y2T2 418 aa13.54□□□□□ -0.24
LIG1-219ENST00000600055 CRYBG3Q68DQ2 2970 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 A0A0B4J2E0 115 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 A0A1B0GX12 115 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 LIPT2A6NK58 231 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 CPSF4LA6NMK7 179 aaKnown RBP13.53□□□□□ -0.24
LIG1-219ENST00000600055 ZNF716A6NP11 495 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 NPIPB7O75200 414 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 PTNP21246 168 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 EDNRAP25101 427 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 KDELR2P33947 212 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 KIR2DL3P43628 341 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 SLC35A1P78382 337 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 H3F3AP84243 136 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 ALG10BQ5I7T1 473 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 C1orf140Q5VVS0 124 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 C6orf89Q6UWU4 347 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 RANBP3LQ86VV4 465 aaPredicted RBP13.53□□□□□ -0.24
LIG1-219ENST00000600055 TSPYL5Q86VY4 417 aaPredicted RBP13.53□□□□□ -0.24
LIG1-219ENST00000600055 KIF18BQ86Y91 864 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 FITM2Q8N6M3 262 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 DNAJA4Q8WW22 397 aaPredicted RBP13.53□□□□□ -0.24
LIG1-219ENST00000600055 ZHX1-C8orf76Q96EF9 292 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 EVA1AQ9H8M9 152 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 BCO1Q9HAY6 547 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 ABCD2Q9UBJ2 740 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 TAGLN3Q9UI15 199 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 CELSR2Q9HCU4 2923 aa13.53□□□□□ -0.24
LIG1-219ENST00000600055 IGKV1D-42A0A075B6H8 117 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 DNPH1O43598 174 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 AKR7A3O95154 331 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 THY1P04216 161 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 GPIP06744 558 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 POU2F1P14859 743 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 CD79BP40259 229 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 CDH12P55289 794 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 CYBRD1Q53TN4 286 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 ENTPD8Q5MY95 495 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 FAM91A1Q658Y4 838 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 ULK3Q6PHR2 472 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.52□□□□□ -0.25
LIG1-219ENST00000600055 CARM1Q86X55 608 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 TMEM99Q8N816 258 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 CCDC197Q8NCU1 140 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 STK35Q8TDR2 534 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 RASSF5Q8WWW0 418 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 PROX1Q92786 737 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 SLC38A4Q969I6 547 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 KTI12Q96EK9 354 aaPredicted RBP13.52□□□□□ -0.25
LIG1-219ENST00000600055 SLC47A1Q96FL8 570 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 NAA11Q9BSU3 229 aaPredicted RBP13.52□□□□□ -0.25
LIG1-219ENST00000600055 PTDSS2Q9BVG9 487 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 ALG2Q9H553 416 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 C12orf10Q9HB07 376 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 GP6Q9HCN6 339 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 ADPRHL2Q9NX46 363 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 SH3GLB1Q9Y371 365 aa13.52□□□□□ -0.25
LIG1-219ENST00000600055 TUBAL3A6NHL2 446 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 ZNF724A8MTY0 619 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 CXCR6O00574 342 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 GSTA4O15217 222 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 FMO6PO60774 539 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 LYPD3O95274 346 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 AHSA1O95433 338 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 PNMTP11086 282 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 NCK1P16333 377 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 CCKARP32238 428 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 NTF4P34130 210 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 RPS5P46782 204 aaKnown RBP13.51□□□□□ -0.25
LIG1-219ENST00000600055 OR1E2P47887 323 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 SLC25A3Q00325 362 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 SORDQ00796 357 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 TLE4Q04727 773 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 OTUD3Q5T2D3 398 aaPredicted RBP13.51□□□□□ -0.25
LIG1-219ENST00000600055 TFAP2EQ6VUC0 442 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 GDF7Q7Z4P5 450 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 RNF148Q8N7C7 305 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 PIGXQ8TBF5 258 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 TAAR8Q969N4 342 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 SLC25A36Q96CQ1 311 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 TPD52L3Q96J77 140 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 KCTD14Q9BQ13 255 aaPredicted RBP13.51□□□□□ -0.25
LIG1-219ENST00000600055 TAPBPLQ9BX59 468 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 KLHL4Q9C0H6 718 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 ADA2Q9NZK5 511 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 SELENONQ9NZV5 590 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 KCNN3Q9UGI6 736 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 BAG5Q9UL15 447 aa13.51□□□□□ -0.25
LIG1-219ENST00000600055 IGKV3D-15A0A087WSY6 115 aa13.5□□□□□ -0.25
LIG1-219ENST00000600055 A0A087WUJ7 227 aa13.5□□□□□ -0.25
LIG1-219ENST00000600055 AQP7P3A6NL99 342 aa13.5□□□□□ -0.25
LIG1-219ENST00000600055 FTCDNL1E5RQL4 147 aa13.5□□□□□ -0.25
LIG1-219ENST00000600055 EIF1BO60739 113 aaKnown RBP13.5□□□□□ -0.25
LIG1-219ENST00000600055 IFNA14P01570 189 aa13.5□□□□□ -0.25
LIG1-219ENST00000600055 CBLP22681 906 aa13.5□□□□□ -0.25
LIG1-219ENST00000600055 UGT2B10P36537 528 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms