RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 MCCC2Q9HCC0 563 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 MRPS30Q9NP92 439 aaKnown RBP11.6□□□□□ -0.55
ZNF558-205ENST00000597304 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.6□□□□□ -0.55
ZNF558-205ENST00000597304 POT1Q9NUX5 634 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 RNF186Q9NXI6 227 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 ANKRD10Q9NXR5 420 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 WNT6Q9Y6F9 365 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 A0A1B0GTQ1 180 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 CCL16O15467 120 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 KDM4BO94953 1096 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 PCDH8O95206 1070 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 LYPD3O95274 346 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 CD1AP06126 327 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 RAB40ALP0C0E4 278 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 PTHLHP12272 177 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 LAMP2P13473 410 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 ADRB3P13945 408 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 NAA10P41227 235 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-205ENST00000597304 CLDN12P56749 244 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 PPP2CBP62714 309 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 PPP2CAP67775 309 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 IL10RAQ13651 578 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 GAS6Q14393 721 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 UNQ9370/PRO34162Q6UXP9 181 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 CLRN3Q8NCR9 226 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 RAB40AQ8WXH6 277 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 MRPS24Q96EL2 167 aaKnown RBP11.6□□□□□ -0.55
ZNF558-205ENST00000597304 COX14Q96I36 57 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 PAWRQ96IZ0 340 aaKnown RBP11.6□□□□□ -0.55
ZNF558-205ENST00000597304 SLC6A20Q9NP91 592 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 HCFC1R1Q9NWW0 138 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 ZNF175Q9Y473 711 aa11.6□□□□□ -0.55
ZNF558-205ENST00000597304 ACOD1A6NK06 481 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 F5H5P2 479 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 PYCARD-AS1I3L0S3 204 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 AQP8O94778 261 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 SIX6O95475 246 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 PLATP00750 562 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 ZNF35P13682 527 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 GMFBP60983 142 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 MAT1AQ00266 395 aaKnown RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 OC90Q02509 493 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 SREBF2Q12772 1141 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 ILF3Q12906 894 aaKnown RBP eCLIP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 UBXN2BQ14CS0 331 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DUSP5Q16690 384 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 ATRAIDQ6UW56 229 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 SLC35F2Q8IXU6 374 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 POMGNT2Q8NAT1 580 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 SP7Q8TDD2 431 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DMRTA2Q96SC8 542 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 SDF2Q99470 211 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 SLC38A3Q99624 504 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 EXOSC3Q9NQT5 275 aaKnown RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 PRELID3BQ9Y3B1 194 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 A0A1B0GW55 424 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 PIN1P1O15428 100 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 GPRIN2O60269 458 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 FMO6PO60774 539 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DUX4L2P0CJ85 424 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DUX4L3P0CJ86 424 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DUX4L4P0CJ87 422 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DUX4L5P0CJ88 424 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DUX4L6P0CJ89 424 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DUX4L7P0CJ90 424 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 CDK2P24941 298 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 SLC6A6P31641 620 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 PSMB10P40306 273 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 RAB28P51157 221 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 H2BFSP57053 126 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 SHEQ5VZ18 495 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 ZNF660Q6AZW8 331 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 PWWP2BQ6NUJ5 590 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 ERN2Q76MJ5 926 aaKnown RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 ZNF619Q8N2I2 560 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 LRRC25Q8N386 305 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 ZDHHC1Q8WTX9 485 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 TCEAL4Q96EI5 215 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 NPAS1Q99742 590 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 CCDC86Q9H6F5 360 aaKnown RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 EVA1AQ9H8M9 152 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 MEPEQ9NQ76 525 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 PRSS16Q9NQE7 514 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 USP36Q9P275 1121 aaKnown RBP11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DUX4Q9UBX2 424 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 V9GY05 133 aa11.59□□□□□ -0.55
ZNF558-205ENST00000597304 DNASE2O00115 360 aaPredicted RBP11.58□□□□□ -0.55
ZNF558-205ENST00000597304 SELENOFO60613 162 aa11.58□□□□□ -0.55
ZNF558-205ENST00000597304 TMEM127O75204 238 aa11.58□□□□□ -0.55
ZNF558-205ENST00000597304 PTP4A3O75365 173 aa11.58□□□□□ -0.55
ZNF558-205ENST00000597304 SPDEFO95238 335 aa11.58□□□□□ -0.55
ZNF558-205ENST00000597304 HPP00738 406 aa11.58□□□□□ -0.55
ZNF558-205ENST00000597304 DBIP07108 87 aaKnown RBP11.58□□□□□ -0.55
ZNF558-205ENST00000597304 VSIG10L2P0DP72 767 aa11.58□□□□□ -0.55
ZNF558-205ENST00000597304 MAPK3P27361 379 aaPredicted RBP11.58□□□□□ -0.55
ZNF558-205ENST00000597304 FAUP35544 74 aaKnown RBP11.58□□□□□ -0.55
ZNF558-205ENST00000597304 TSFMP43897 325 aaKnown RBP11.58□□□□□ -0.55
ZNF558-205ENST00000597304 CBFBQ13951 182 aa11.58□□□□□ -0.55
ZNF558-205ENST00000597304 RBMS2Q15434 407 aaKnown RBP11.58□□□□□ -0.55
ZNF558-205ENST00000597304 TEAD2Q15562 447 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms