RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 hCG_2039718K7EN88 272 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 TGM6O95932 706 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 FABP3P05413 133 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 GPIP06744 558 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 RHCEP18577 417 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 ENPP1P22413 925 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 YAP1P46937 504 aaKnown RBP12.86□□□□□ -0.35
VRK3-213ENST00000597215 SMSP52788 366 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 SLC35A1P78382 337 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 ADORA2A-AS1P86434 159 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 VLDLRP98155 873 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 EGR4Q05215 589 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 FAM98BQ52LJ0 330 aaKnown RBP12.86□□□□□ -0.35
VRK3-213ENST00000597215 OR2A2Q6IF42 318 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 TTC33Q6PID6 262 aaPredicted RBP12.86□□□□□ -0.35
VRK3-213ENST00000597215 PLXDC2Q6UX71 529 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 LINC00114Q6XXX2 140 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 WDR88Q6ZMY6 472 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 DNAJA3Q96EY1 480 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 ZNF300Q96RE9 604 aaPredicted RBP12.86□□□□□ -0.35
VRK3-213ENST00000597215 SEPHS2Q99611 448 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 MAGIXQ9H6Y5 334 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 NDUFAF4Q9P032 175 aa12.86□□□□□ -0.35
VRK3-213ENST00000597215 NCOA6Q14686 2063 aaPredicted RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 MED12LQ86YW9 2145 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 GCN1Q92616 2671 aaKnown RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 LIPT2A6NK58 231 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 HSPB2A8KAH6 182 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 OR2T1O43869 369 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 EIF1BO60739 113 aaKnown RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 CIB2O75838 187 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 PRSS23O95084 383 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 RCBTB2O95199 551 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 IMPDH2P12268 514 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 HOXB6P17509 224 aaKnown RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 FPR1P21462 350 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 CEACAM8P31997 349 aaPredicted RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 RBM34P42696 430 aaKnown RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 RPS5P46782 204 aaKnown RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 CHRNB3Q05901 458 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 TRAM2Q15035 370 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 OR7A5Q15622 319 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 HSPB2Q16082 182 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 FAM69AQ5T7M9 428 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 GTF2IRD2BQ6EKJ0 949 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 TSEN54Q7Z6J9 526 aaKnown RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 GTF2IRD2Q86UP8 949 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 SPATA24Q86W54 205 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 LSRQ86X29 649 aaPredicted RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 ZDHHC21Q8IVQ6 265 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 SLC43A2Q8N370 569 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 FAM26EQ8N5C1 309 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 OR6S1Q8NH40 331 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 MFSD8Q8NHS3 518 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 RNF128Q8TEB7 428 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 KTI12Q96EK9 354 aaPredicted RBP12.85□□□□□ -0.35
VRK3-213ENST00000597215 HS6ST2Q96MM7 605 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 PIP5K1AQ99755 562 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 PRSS27Q9BQR3 290 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 ZNF426Q9BUY5 554 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 SLC19A3Q9BZV2 496 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 ANKRD19PQ9H560 264 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 RNF122Q9H9V4 155 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 COQ3Q9NZJ6 369 aa12.85□□□□□ -0.35
VRK3-213ENST00000597215 PCNX1Q96RV3 2341 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 IGHV3-15A0A0B4J1V0 119 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 A0A0G2JNJ9 132 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 DHRS12A0PJE2 317 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 FFAR1O14842 300 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
VRK3-213ENST00000597215 AQP8O94778 261 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 TOXO94900 526 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 LDLRP01130 860 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 TMIGD3P0DMS9 266 aaPredicted RBP12.84□□□□□ -0.35
VRK3-213ENST00000597215 RAP2AP10114 183 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 UMPSP11172 480 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 GTF2E2P29084 291 aaKnown RBP12.84□□□□□ -0.35
VRK3-213ENST00000597215 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
VRK3-213ENST00000597215 MFSD13AQ14CX5 517 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 RNPS1Q15287 305 aaKnown RBP12.84□□□□□ -0.35
VRK3-213ENST00000597215 IQCCQ4KMZ1 466 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 C1orf146Q5VVC0 180 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 PAQR6Q6TCH4 344 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 P3H2Q8IVL5 708 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 NKAIN4Q8IVV8 208 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 MCEMP1Q8IX19 187 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 PIK3C3Q8NEB9 887 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 TMEM239Q8WW34 195 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 ROBO4Q8WZ75 1007 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 ZNF347Q96SE7 839 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 NAA11Q9BSU3 229 aaPredicted RBP12.84□□□□□ -0.35
VRK3-213ENST00000597215 PTDSS2Q9BVG9 487 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 NMNAT1Q9HAN9 279 aaPredicted RBP12.84□□□□□ -0.35
VRK3-213ENST00000597215 GLRX2Q9NS18 164 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 RHCGQ9UBD6 479 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 Q9UFV3 132 aa12.84□□□□□ -0.35
VRK3-213ENST00000597215 TCRBV3S1A0A5B6 114 aa12.83□□□□□ -0.36
VRK3-213ENST00000597215 CLEC18AA5D8T8 446 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms