RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 GNPDA2Q8TDQ7 276 aa15.72■□□□□ 0.11
SHKBP1-205ENST00000594973 STACQ99469 402 aa15.72■□□□□ 0.11
SHKBP1-205ENST00000594973 TBC1D17Q9HA65 648 aa15.72■□□□□ 0.11
SHKBP1-205ENST00000594973 SLC39A1Q9NY26 324 aa15.72■□□□□ 0.11
SHKBP1-205ENST00000594973 SF3B6Q9Y3B4 125 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-205ENST00000594973 FAM25EA8MYX2 175 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 M0R233 179 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 TGM6O95932 706 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 DBIP07108 87 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 MAOAP21397 527 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 DNASE1P24855 282 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 OMPP47874 163 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 ZNF136P52737 540 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 EIPR1Q53HC9 387 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 EXOSC6Q5RKV6 272 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 UXS1Q8NBZ7 420 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 OR8D4Q8NGM9 314 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 C1orf216Q8TAB5 229 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 TEX47Q8TBZ9 253 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 PCNPQ8WW12 178 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 ACOT11Q8WXI4 607 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 NR4A3Q92570 626 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 C1GALT1C1Q96EU7 318 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 AHCYL2Q96HN2 611 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 SPACA7Q96KW9 195 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 LRR1Q96L50 414 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 ERMAPQ96PL5 475 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 TSSK6Q9BXA6 273 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 IL20RAQ9UHF4 553 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 GPR52Q9Y2T5 361 aa15.71■□□□□ 0.11
SHKBP1-205ENST00000594973 A8MXK9 166 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 SNAPC5O75971 98 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 THBS1P07996 1170 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 NID1P14543 1247 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 SMSP52788 366 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 TSPAN31Q12999 210 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 ZNF169Q14929 603 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 CRTC2Q53ET0 693 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 NHLRC3Q5JS37 347 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 HACD4Q5VWC8 232 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 ZCCHC12Q6PEW1 402 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 CD200R1LQ6Q8B3 271 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 OR4N2Q8NGD1 307 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 TMEM203Q969S6 136 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 UBL7Q96S82 380 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 CDX2Q99626 313 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 ZNF436Q9C0F3 470 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 SPRTNQ9H040 489 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 UCK1Q9HA47 277 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 PDE7BQ9NP56 450 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 LRIT1Q9P2V4 623 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 COPS3Q9UNS2 423 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 PLCL2Q9UPR0 1127 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 MRPS33Q9Y291 106 aaKnown RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 TMEM184BQ9Y519 407 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 NUBP2Q9Y5Y2 271 aa15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 SPIN1Q9Y657 262 aaPredicted RBP15.71■□□□□ 0.1
SHKBP1-205ENST00000594973 SLC22A23A1A5C7 686 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 CASKO14936 926 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 OR5F1O95221 314 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 RAB36O95755 333 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 HTR2AP28223 471 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 HOXA1P49639 335 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 PGDP52209 483 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 SKP1P63208 163 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 CDK5Q00535 292 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 NNATQ16517 81 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 DECR1Q16698 335 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 C14orf28Q4W4Y0 310 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 LRFN4Q6PJG9 635 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 RANBP3LQ86VV4 465 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 OR5T2Q8NGG2 359 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 SAP130Q9H0E3 1048 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 HDHD2Q9H0R4 259 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 PRTFDC1Q9NRG1 225 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 DTX4Q9Y2E6 619 aa15.7■□□□□ 0.1
SHKBP1-205ENST00000594973 TLCD2A6NGC4 264 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 ABCD4O14678 606 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 BRINP1O60477 761 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 CH25HO95992 272 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 MYF5P13349 255 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 GNSP15586 552 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 S1PR1P21453 382 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 SSTR2P30874 369 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 GABRA5P31644 462 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 MAP3K8P41279 467 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 FNTBP49356 437 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 OR1D5P58170 312 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 AMZ1Q400G9 498 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 SLC27A4Q6P1M0 643 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 CHMP1BQ7LBR1 199 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 C17orf82Q86X59 251 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 POLDIP3Q9BY77 421 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 PCED1AQ9H1Q7 454 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 ANKRD19PQ9H560 264 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 NOSIPQ9Y314 301 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 THADAQ6YHU6 1953 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 CABIN1Q9Y6J0 2220 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 TRDV1A0A1B0GX56 115 aa15.69■□□□□ 0.1
SHKBP1-205ENST00000594973 CDHR4A6H8M9 788 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms