RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 RUNDC3AQ59EK9 446 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 COQ5Q5HYK3 327 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 FBXW9Q5XUX1 488 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 P2RY8Q86VZ1 359 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 WFDC8Q8IUA0 241 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 STK35Q8TDR2 534 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 ANKRD27Q96NW4 1050 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 CGREF1Q99674 301 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 PIP5K1AQ99755 562 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 TRIM2Q9C040 744 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 ZNF446Q9NWS9 450 aa15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 TESQ9UGI8 421 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 HRNRQ86YZ3 2850 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-204ENST00000594862 ABCA4P78363 2273 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 LIPT2A6NK58 231 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 ZNF814B7Z6K7 855 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 SIAH2O43255 324 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 VAMP5O95183 116 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 AHSA1O95433 338 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 IMPDH2P12268 514 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 COX5AP20674 150 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 ARFIP2P53365 341 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 CYP51A1Q16850 503 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 C1QTNF12Q5T7M4 302 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 C6orf89Q6UWU4 347 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 BHLHA15Q7RTS1 189 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 LSMEM1Q8N8F7 131 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 DNAJA4Q8WW22 397 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 C3orf49Q96BT1 292 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 SH3GL1Q99961 368 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 IKZF5Q9H5V7 419 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 ESRP2Q9H6T0 727 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 MALT1Q9UDY8 824 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 CHST2Q9Y4C5 530 aa15.71■□□□□ 0.11
SHKBP1-204ENST00000594862 A0A1W2PPR1 153 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 AQP7P3A6NL99 342 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ELOA3DA6NLF2 546 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 BBIP1A8MTZ0 92 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 TMEM229AB2RXF0 380 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 KLF4O43474 513 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 TMCC2O75069 709 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 NPPAP01160 153 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 VIMP08670 466 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 PNMTP11086 282 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 PRG2P13727 222 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 CD53P19397 219 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 KLK2P20151 261 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ADSLP30566 484 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ACKR1Q16570 336 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ELOA3BQ3SY89 546 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 OTUD3Q5T2D3 398 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 INTS11Q5TA45 600 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 C1orf140Q5VVS0 124 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ATG4DQ86TL0 474 aaPredicted RBP15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ARMC8Q8IUR7 673 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 UBE2J2Q8N2K1 259 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ELOA3Q8NG57 546 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 TMEM45BQ96B21 275 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 MUCL1Q96DR8 90 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 CCDC134Q9H6E4 229 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 FGFR1OP2Q9NVK5 253 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ASB6Q9NWX5 421 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 SELENONQ9NZV5 590 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 PRSS50Q9UI38 385 aa15.7■□□□□ 0.1
SHKBP1-204ENST00000594862 ZC3H12DA2A288 527 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 FRS3O43559 492 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 GGT1P19440 569 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 LOXP28300 417 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 GTF2E2P29084 291 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 RGS8P57771 180 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 CEACAM7Q14002 265 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 CYLC2Q14093 348 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 SLC17A1Q14916 467 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 OR7A5Q15622 319 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 TAB1Q15750 504 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 TRMT5Q32P41 509 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 TIMM23BQ5SRD1 257 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 FAM91A1Q658Y4 838 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 CASP12Q6UXS9 341 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 ZNF704Q6ZNC4 412 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 C22orf34Q6ZV56 151 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 PATL1Q86TB9 770 aaKnown RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 RANBP3LQ86VV4 465 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 PLPPR2Q96GM1 343 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 UBTD1Q9HAC8 227 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 TAS2R16Q9NYV7 291 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 FLVCR1Q9Y5Y0 555 aa15.69■□□□□ 0.1
SHKBP1-204ENST00000594862 NAV3Q8IVL0 2385 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 SLC22A2O15244 555 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 ATP8B1O43520 1251 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 OR2T1O43869 369 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 NPIPB7O75200 414 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 CAPRIN1Q14444 709 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 ADRM1Q16186 407 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 SWT1Q5T5J6 900 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 TMEM225Q6GV28 225 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 OR7E24Q6IFN5 339 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 ULK3Q6PHR2 472 aa15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 ABHD12BQ7Z5M8 362 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-204ENST00000594862 NET1Q7Z628 596 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms