RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PRSS51A0A1B0GVH4 220 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 SHISA3A0PJX4 238 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 EVPLLA8MZ36 301 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 OVOL3O00110 214 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 GTPBP1O00178 669 aaKnown RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 ANP32DO95626 131 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 PLAUP00749 431 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 IGKV1D-16P01601 117 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 NAT2P11245 290 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 G6PDP11413 515 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 SDC1P18827 310 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 SLC7A1P30825 629 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 SFTPDP35247 375 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 SUMO3P55854 103 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 DSCR9P59020 149 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 POU6F2P78424 691 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 ITGADQ13349 1161 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 DOC2BQ14184 412 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF239Q16600 458 aaKnown RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 NRF1Q16656 503 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 TRMT5Q32P41 509 aaKnown RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 ZNF672Q499Z4 452 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 SAMD4BQ5PRF9 694 aaKnown RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 NCMAPQ5T1S8 102 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 HMBOX1Q6NT76 420 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 MFSD12Q6NUT3 480 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 FCRLAQ7L513 359 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 P2RY8Q86VZ1 359 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 SNX32Q86XE0 403 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 GATSQ8NAP1 163 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 FAM110BQ8TC76 370 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 RNF128Q8TEB7 428 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 TMEM158Q8WZ71 300 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 ROBO4Q8WZ75 1007 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 JADE3Q92613 823 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 C3orf30Q96M34 536 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 ADAD1Q96M93 576 aaKnown RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 OR52E6Q96RD3 313 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 STACQ99469 402 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 RHNO1Q9BSD3 238 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 BTBD2Q9BX70 525 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 TMEM185BQ9H7F4 350 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 DUSP22Q9NRW4 184 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 GIN1Q9NXP7 522 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 ARMCX1Q9P291 453 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 BAIAP2L1Q9UHR4 511 aa8.38□□□□□ -1.07
BRCA1-226ENST00000591534 FAF1Q9UNN5 650 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-226ENST00000591534 TMEM247A6NEH6 219 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 RNF212BA8MTL3 300 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 NR5A2O00482 541 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 RNASET2O00584 256 aaKnown RBP8.37□□□□□ -1.07
BRCA1-226ENST00000591534 MRASO14807 208 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 SCAMP2O15127 329 aaKnown RBP8.37□□□□□ -1.07
BRCA1-226ENST00000591534 AKAP10O43572 662 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 CD5LO43866 347 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 ADAP00813 363 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 OPN1LWP04000 364 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 LINGO3P0C6S8 592 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 EFNA1P20827 205 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-226ENST00000591534 PSMA4P25789 261 aaKnown RBP8.37□□□□□ -1.07
BRCA1-226ENST00000591534 MAP3K8P41279 467 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 NUDT2P50583 147 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 P2RX1P51575 399 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 RAC3P60763 192 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 TP53BP2Q13625 1128 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 GNA13Q14344 377 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 MLC1Q15049 377 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 TMEM176BQ3YBM2 270 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-226ENST00000591534 CHRFAM7AQ494W8 412 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 AGAP6Q5VW22 663 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 TFAP2EQ6VUC0 442 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 Q6ZT83 130 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 BHLHA15Q7RTS1 189 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-226ENST00000591534 MED12LQ86YW9 2145 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 SLC30A8Q8IWU4 369 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 TUSC5Q8IXB3 177 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 GABRG1Q8N1C3 465 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 SLC16A11Q8NCK7 471 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 TOR1AIP2Q8NFQ8 470 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 OR8J3Q8NGG0 315 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 PHOSPHO1Q8TCT1 267 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 ABHD3Q8WU67 409 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 CIDECQ96AQ7 238 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-226ENST00000591534 MRGPRX4Q96LA9 322 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 TSSK3Q96PN8 268 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 SLCO5A1Q9H2Y9 848 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 YAE1D1Q9NRH1 226 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 SERINC1Q9NRX5 453 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 ZCCHC3Q9NUD5 404 aaKnown RBP8.37□□□□□ -1.07
BRCA1-226ENST00000591534 ATP6V1HQ9UI12 483 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 BTNL2Q9UIR0 455 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 LIPT1Q9Y234 373 aa8.37□□□□□ -1.07
BRCA1-226ENST00000591534 LOC100653049A0A140TA62 436 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 RFXANKO14593 260 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 AIM2O14862 343 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 GCM2O75603 506 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-226ENST00000591534 KRT34O76011 436 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 KRT75O95678 551 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 AGR2O95994 175 aa8.36□□□□□ -1.07
BRCA1-226ENST00000591534 SOD3P08294 240 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms