RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FCGR1AP12314 374 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 FASP25445 335 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 GTF2E2P29084 291 aaKnown RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 RPS5P46782 204 aaKnown RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 DIO1P49895 249 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 UGT2B15P54855 530 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 EGR4Q05215 589 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 MRPL49Q13405 166 aaKnown RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 IGFBP7Q16270 282 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 PPP4R4Q6NUP7 873 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 PODNL1Q6PEZ8 512 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 DOLPP1Q86YN1 238 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 CDK20Q8IZL9 346 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 RNF113BQ8IZP6 322 aaKnown RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 C10orf53Q8N6V4 93 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 CPNE4Q96A23 557 aaPredicted RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 ALPK1Q96QP1 1244 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 TRIB1Q96RU8 372 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 ZNF426Q9BUY5 554 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 PRRG4Q9BZD6 226 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 COQ10BQ9H8M1 238 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 KRCC1Q9NPI7 259 aaPredicted RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 DNAJB9Q9UBS3 223 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 MCTS1Q9ULC4 181 aaKnown RBP12.23□□□□□ -0.45
VMP1-210ENST00000589823 OSGIN2Q9Y236 505 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 TRAPPC4Q9Y296 219 aa12.23□□□□□ -0.45
VMP1-210ENST00000589823 DNAJC13O75165 2243 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 A0A087WUU8 490 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 HTR3EA5X5Y0 456 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 LIPT2A6NK58 231 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 CLCA1A8K7I4 914 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 CLOCKO15516 846 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 DNPH1O43598 174 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 LDLRP01130 860 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 IMPDH2P12268 514 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 ENPP1P22413 925 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 ACVR2AP27037 513 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 RAC3P60763 192 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 SLC35A1P78382 337 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 GK3PQ14409 553 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 MFSD13AQ14CX5 517 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 OR7A5Q15622 319 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 ACSF3Q4G176 576 aaPredicted RBP12.22□□□□□ -0.45
VMP1-210ENST00000589823 EMC4Q5J8M3 183 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 C1orf185Q5T7R7 199 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 C1QL3Q5VWW1 255 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 MBOAT2Q6ZWT7 520 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 P4HA3Q7Z4N8 544 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 LSRQ86X29 649 aaPredicted RBP12.22□□□□□ -0.45
VMP1-210ENST00000589823 OR6S1Q8NH40 331 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 PFN4Q8NHR9 129 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 MFSD8Q8NHS3 518 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 SLC7A13Q8TCU3 470 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 TAAR8Q969N4 342 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 SLC25A36Q96CQ1 311 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 SGTBQ96EQ0 304 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 NAA11Q9BSU3 229 aaPredicted RBP12.22□□□□□ -0.45
VMP1-210ENST00000589823 PTDSS2Q9BVG9 487 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 C6orf203Q9P0P8 240 aaPredicted RBP12.22□□□□□ -0.45
VMP1-210ENST00000589823 SH3BGRL2Q9UJC5 107 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 TINAGQ9UJW2 476 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 SAMHD1Q9Y3Z3 626 aaKnown RBP12.22□□□□□ -0.45
VMP1-210ENST00000589823 LYVE1Q9Y5Y7 322 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 SVILO95425 2214 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 MED12Q93074 2177 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 SHANK1Q9Y566 2161 aa12.22□□□□□ -0.45
VMP1-210ENST00000589823 TRBV4-1A0A0J9YWV2 114 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 SH3PXD2BA1X283 911 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 ENO4A6NNW6 628 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.45
VMP1-210ENST00000589823 E2F6O75461 281 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 CH25HO95992 272 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 MT-ATP6P00846 226 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 IGF2P01344 180 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 IFI30P13284 250 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 FPR1P21462 350 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 FUT4P22083 530 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 GNLYP22749 145 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 IFNGR2P38484 337 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 HMGA2P52926 109 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 NUP107P57740 925 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 PON3Q15166 354 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.45
VMP1-210ENST00000589823 EXOC3L2Q2M3D2 409 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 RPTNQ6XPR3 784 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 B3GNT6Q6ZMB0 384 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 NRMQ8IXM6 262 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 LINC00471Q8N535 108 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 OR4K5Q8NGD3 323 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 PIGXQ8TBF5 258 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 ZNF845Q96IR2 970 aaPredicted RBP12.21□□□□□ -0.45
VMP1-210ENST00000589823 BDH2Q9BUT1 245 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 ASPNQ9BXN1 380 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 SRXN1Q9BYN0 137 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 CALHM2Q9HA72 323 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 S100A14Q9HCY8 104 aa12.21□□□□□ -0.45
VMP1-210ENST00000589823 MEPEQ9NQ76 525 aaPredicted RBP12.21□□□□□ -0.45
VMP1-210ENST00000589823 TMEM5Q9Y2B1 443 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms