RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 FZD7O75084 574 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 REM1O75628 298 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SC5DO75845 299 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 NCR1O76036 304 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 PPP1R3DO95685 299 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 CHRNB1P11230 501 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 APEHP13798 732 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 CTSEP14091 401 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 ARSBP15848 533 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 TCEA1P23193 301 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 LCN1P31025 176 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SSTR4P31391 388 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 DIO1P49895 249 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 MMP15P51511 669 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 VSX2P58304 361 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 FXYD6P3P58550 94 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 AP3S2P59780 193 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 CD83Q01151 205 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 RPL6Q02878 288 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SLC3A1Q07837 685 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 FOXC1Q12948 553 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SERTAD2Q14140 314 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 CRMP1Q14194 572 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 P2RY14Q15391 338 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 STPG1Q5TH74 334 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 WDR88Q6ZMY6 472 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 CREB3L2Q70SY1 520 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 NUP54Q7Z3B4 507 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 ABI3BPQ7Z7G0 1075 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SLC7A5P1Q8MH63 180 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 GHDCQ8N2G8 530 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 FAM160A2Q8N612 972 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 ZNF527Q8NB42 609 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 OR51A7Q8NH64 312 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 TRMT10AQ8TBZ6 339 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SNX33Q8WV41 574 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 CNOT9Q92600 299 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SMIM19Q96E16 107 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 MSANTD3Q96H12 275 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SENP5Q96HI0 755 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 ART5Q96L15 291 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 MRGPRX1Q96LB2 322 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 DGAT2Q96PD7 388 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 ERMAPQ96PL5 475 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 OR2M2Q96R28 347 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 TNFRSF13CQ96RJ3 184 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 IER2Q9BTL4 223 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 MED28Q9H204 178 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 ABCG5Q9H222 651 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 LRRN3Q9H3W5 708 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 EMC7Q9NPA0 242 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 C20orf141Q9NUB4 165 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 DNAJB12Q9NXW2 375 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 MALT1Q9UDY8 824 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 IL20RAQ9UHF4 553 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 MOKQ9UQ07 419 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 RASD1Q9Y272 281 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
NEDD4L-223ENST00000588516 TMEM8BA6NDV4 472 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 NAP1L6A6NFF2 107 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 A8MU76 341 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 SULT1B1O43704 296 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 GSTZ1O43708 216 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 ZNF432O94892 652 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 SEMA4FO95754 770 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 CBX7O95931 251 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 EGFP01133 1207 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 SPINK2P20155 84 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 MAPK3P27361 379 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 SHC1P29353 583 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 PYCR1P32322 319 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 ACAA2P42765 397 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 SIRPAP78324 504 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 IGLV3-21P80748 117 aaPredicted RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 MRPS10P82664 201 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 ID2Q02363 134 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 ZNF85Q03923 595 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 CRYZQ08257 329 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 DYRK1AQ13627 763 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 GPR176Q14439 515 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 EXOSC7Q15024 291 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 CDONQ4KMG0 1287 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 THOC7Q6I9Y2 204 aaKnown RBP12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 SLC35F2Q8IXU6 374 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 TOMM5Q8N4H5 51 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 YIPF7Q8N8F6 280 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 OR7G1Q8NGA0 311 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 OR4M1Q8NGD0 313 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 OR14A16Q8NHC5 309 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 GRHL3Q8TE85 626 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 THAP4Q8WY91 577 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 GHSRQ92847 366 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 TBX5Q99593 518 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 SLITRK2Q9H156 845 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 ARRDC1-AS1Q9H2J1 176 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 MED20Q9H944 212 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 B3GAT2Q9NPZ5 323 aa12.9□□□□□ -0.34
NEDD4L-223ENST00000588516 MEPEQ9NQ76 525 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms