RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 POLR2HP52434 150 aaKnown RBP12.28□□□□□ -0.44
DNMT1-213ENST00000587604 HPCAP84074 193 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 GGTLC2Q14390 218 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 GPAT3Q53EU6 434 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 PAQR6Q6TCH4 344 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 KLHL24Q6TFL4 600 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 HMGN2P46Q86SG4 172 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 CMIPQ8IY22 773 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 POMGNT2Q8NAT1 580 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.28□□□□□ -0.44
DNMT1-213ENST00000587604 CNOT9Q92600 299 aaKnown RBP12.28□□□□□ -0.44
DNMT1-213ENST00000587604 TMEM45BQ96B21 275 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 MSI2Q96DH6 328 aaKnown RBP12.28□□□□□ -0.44
DNMT1-213ENST00000587604 FBXO17Q96EF6 278 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 NEURL3Q96EH8 262 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 C19orf24Q9BVV8 132 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 DPY30Q9C005 99 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 AKTIPQ9H8T0 292 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 OBP2BQ9NPH6 170 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 MOKQ9UQ07 419 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 FKBP7Q9Y680 259 aa12.28□□□□□ -0.44
DNMT1-213ENST00000587604 LOC100289279A0A1B0GTE1 492 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 LOC390937A0A1W2PQ73 354 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 SLC35F4A4IF30 521 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 AGAP5A6NIR3 686 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 FAAHO00519 579 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 AP3D1O14617 1153 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 C8BP07358 591 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 PAX7P23759 505 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 TACR3P29371 465 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 SNRPD2P62316 118 aaKnown RBP12.27□□□□□ -0.45
DNMT1-213ENST00000587604 CASP8Q14790 479 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 FAM120AOSQ5T036 256 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 ZIC4Q8N9L1 334 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 TESCQ96BS2 214 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 SF3B5Q9BWJ5 86 aaKnown RBP12.27□□□□□ -0.45
DNMT1-213ENST00000587604 PRR14Q9BWN1 585 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 PIF1Q9H611 641 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 MYOZ1Q9NP98 299 aaPredicted RBP12.27□□□□□ -0.45
DNMT1-213ENST00000587604 MARCOQ9UEW3 520 aaPredicted RBP12.27□□□□□ -0.45
DNMT1-213ENST00000587604 LGALS13Q9UHV8 139 aa12.27□□□□□ -0.45
DNMT1-213ENST00000587604 ZC3H12DA2A288 527 aaKnown RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 HMGN4O00479 90 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 APEHP13798 732 aaKnown RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 CDH2P19022 906 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 CHI3L1P36222 383 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 SERPINF1P36955 418 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 PDCD2Q16342 344 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 OTUD3Q5T2D3 398 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 AAED1Q7RTV5 226 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 ABHD12BQ7Z5M8 362 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 NUDCD3Q8IVD9 361 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 TMEM99Q8N816 258 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 OR9K2Q8NGE7 335 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 PPP1R36Q96LQ0 422 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 FOXN4Q96NZ1 517 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 ZNF385AQ96PM9 386 aaKnown RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 SORCS2Q96PQ0 1159 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 TRNT1Q96Q11 434 aaKnown RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 SLC35A5Q9BS91 424 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 ADAM19Q9H013 955 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 MTHFD2LQ9H903 347 aaPredicted RBP12.26□□□□□ -0.45
DNMT1-213ENST00000587604 CHODLQ9H9P2 273 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 TMEM45AQ9NWC5 275 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 PRDM4Q9UKN5 801 aa12.26□□□□□ -0.45
DNMT1-213ENST00000587604 IGHV1-18A0A0C4DH31 117 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 IGHV4-61A0A0C4DH41 118 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 CFAP73A6NFT4 308 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 KLF11O14901 512 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 GPIP06744 558 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 UQCRBP14927 111 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 HNF1AP20823 631 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 ETV4P43268 484 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 TXNL4AP83876 142 aaKnown RBP12.25□□□□□ -0.45
DNMT1-213ENST00000587604 CEACAM7Q14002 265 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 GNA13Q14344 377 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 SQLEQ14534 574 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 SYPL1Q16563 259 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 GSTA3Q16772 222 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 DPY19L1Q2PZI1 675 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 HIKESHIQ53FT3 197 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 SPANXN4Q5MJ08 99 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 LRRC74BQ6ZQY2 392 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 IL17RELQ6ZVW7 336 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 RNF130Q86XS8 419 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 ANKFN1Q8N957 763 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 ZNF540Q8NDQ6 660 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 AURKBQ96GD4 344 aaPredicted RBP12.25□□□□□ -0.45
DNMT1-213ENST00000587604 SLC38A2Q96QD8 506 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 VRK1Q99986 396 aaPredicted RBP12.25□□□□□ -0.45
DNMT1-213ENST00000587604 KCNS3Q9BQ31 491 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 KATNB1Q9BVA0 655 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 SLC38A1Q9H2H9 487 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 CA10Q9NS85 328 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 BTNL2Q9UIR0 455 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 ANK2Q01484 3957 aa12.25□□□□□ -0.45
DNMT1-213ENST00000587604 LIPT2A6NK58 231 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 AQP7P3A6NL99 342 aa12.24□□□□□ -0.45
DNMT1-213ENST00000587604 B9A039 149 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms