RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 APOBEC1P41238 236 aaKnown RBP10.17□□□□□ -0.78
LIG3-207ENST00000586119 KCNJ10P78508 379 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 H3F3AP84243 136 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 LGALS3BPQ08380 585 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 PDCD2Q16342 344 aaPredicted RBP10.17□□□□□ -0.78
LIG3-207ENST00000586119 CYB5R2Q6BCY4 276 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 KLHL17Q6TDP4 642 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 CASP12Q6UXS9 341 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 NATD1Q8N6N6 113 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 MOAP1Q96BY2 351 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 ROPN1LQ96C74 230 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 NUF2Q9BZD4 464 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 SLC17A5Q9NRA2 495 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 ASIC5Q9NY37 505 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 TAS2R16Q9NYV7 291 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 EMC3Q9P0I2 261 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 CDC42EP3Q9UKI2 254 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 MOKQ9UQ07 419 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 MGAT4BQ9UQ53 548 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 WDR45Q9Y484 360 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 FLVCR1Q9Y5Y0 555 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 USH1CQ9Y6N9 552 aa10.17□□□□□ -0.78
LIG3-207ENST00000586119 TMED7-TICAM2A0A0A6YYA0 188 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 DUXAA6NLW8 204 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 H7C417 338 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 LMX1BO60663 402 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 VIMP08670 466 aaKnown RBP10.16□□□□□ -0.78
LIG3-207ENST00000586119 KITP10721 976 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 SLC25A16P16260 332 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 LBPP18428 481 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 USF1P22415 310 aaPredicted RBP10.16□□□□□ -0.78
LIG3-207ENST00000586119 EFNA4P52798 201 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 SLC16A1P53985 500 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 DSCR9P59020 149 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 LSM11P83369 360 aaKnown RBP eCLIP10.16□□□□□ -0.78
LIG3-207ENST00000586119 EMX2Q04743 252 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 GGTLC2Q14390 218 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 SYPL1Q16563 259 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 OGFOD2Q6N063 350 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 GRINAQ7Z429 371 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 ANKS4BQ8N8V4 417 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 ANKFN1Q8N957 763 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 ZIC4Q8N9L1 334 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 MIPOL1Q8TD10 442 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 SLC25A43Q8WUT9 341 aaPredicted RBP10.16□□□□□ -0.78
LIG3-207ENST00000586119 C3orf49Q96BT1 292 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 FBXO17Q96EF6 278 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 MAELQ96JY0 434 aaKnown RBP10.16□□□□□ -0.78
LIG3-207ENST00000586119 FOXN4Q96NZ1 517 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 ZNF385AQ96PM9 386 aaKnown RBP10.16□□□□□ -0.78
LIG3-207ENST00000586119 SORCS2Q96PQ0 1159 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 SOX7Q9BT81 388 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 PRR14Q9BWN1 585 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 SAP130Q9H0E3 1048 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 AKTIPQ9H8T0 292 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 CHODLQ9H9P2 273 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 EXD2Q9NVH0 621 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 TMEM181Q9P2C4 612 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 UPB1Q9UBR1 384 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 MALT1Q9UDY8 824 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 MARCOQ9UEW3 520 aaPredicted RBP10.16□□□□□ -0.78
LIG3-207ENST00000586119 OSGIN1Q9UJX0 560 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 TMED7Q9Y3B3 224 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 HDGFL3Q9Y3E1 203 aa10.16□□□□□ -0.78
LIG3-207ENST00000586119 VWC2LB2RUY7 222 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 RNASET2O00584 256 aaKnown RBP10.15□□□□□ -0.78
LIG3-207ENST00000586119 SDHDO14521 159 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 GPR171O14626 319 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 AKR7A3O95154 331 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 AK1P00568 194 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 F12P00748 615 aaPredicted RBP10.15□□□□□ -0.78
LIG3-207ENST00000586119 TROVE2P10155 538 aaKnown RBP eCLIP10.15□□□□□ -0.78
LIG3-207ENST00000586119 UQCRC2P22695 453 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 TACR3P29371 465 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 APOBEC3AP31941 199 aaPredicted RBP10.15□□□□□ -0.78
LIG3-207ENST00000586119 MAGEA8P43361 318 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 NME5P56597 212 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 SLC17A1Q14916 467 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 SWI5Q1ZZU3 235 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 GPAT3Q53EU6 434 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 HIKESHIQ53FT3 197 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 AP1ARQ63HQ0 302 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 SAXO2Q658L1 398 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 ZNF544Q6NX49 715 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 BHLHB9Q6PI77 547 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 EPGNQ6UW88 154 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 SPATA19Q7Z5L4 167 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 DEPDC4Q8N2C3 294 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 TMEM99Q8N816 258 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 PIGXQ8TBF5 258 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 PROX1Q92786 737 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 MSI2Q96DH6 328 aaKnown RBP10.15□□□□□ -0.78
LIG3-207ENST00000586119 ZHX1-C8orf76Q96EF9 292 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 ZNF317Q96PQ6 595 aaPredicted RBP10.15□□□□□ -0.78
LIG3-207ENST00000586119 CCDC28BQ9BUN5 200 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 C19orf24Q9BVV8 132 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 AMBRA1Q9C0C7 1298 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 SHARPINQ9H0F6 387 aa10.15□□□□□ -0.78
LIG3-207ENST00000586119 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.15□□□□□ -0.78
LIG3-207ENST00000586119 TMEM160Q9NX00 188 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms