RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 CDK2AP1O14519 115 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 RNF13O43567 381 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 HPGDSO60760 199 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 FGF9P31371 208 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 AP2S1P53680 142 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 COL19A1Q14993 1142 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 PRR22Q8IZ63 422 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 OR5M3Q8NGP4 307 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 C4orf36Q96KX1 117 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 NDC1Q9BTX1 674 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 MCUBQ9NWR8 336 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 ING3Q9NXR8 418 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 NLKQ9UBE8 527 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 ADAM18Q9Y3Q7 739 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 CLDN16Q9Y5I7 305 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 IER3IP1Q9Y5U9 82 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 LILRA5A6NI73 299 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 TMEM150CB9EJG8 249 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF749O43361 778 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 SOX30O94993 753 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 PEPDP12955 493 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 IL9P15248 144 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 POU3F3P20264 500 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 ACVR1BP36896 505 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 NAA10P41227 235 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 HCCSP53701 268 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 HSD17B7P56937 341 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 OR1D5P58170 312 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 HNRNPKP61978 463 aaKnown RBP eCLIP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 GRM7Q14831 915 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 TCTE1Q5JU00 501 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 RPTNQ6XPR3 784 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 GRAMD2AQ8IUY3 354 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 PHOSPHO1Q8TCT1 267 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 ADAMTS18Q8TE60 1221 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 SMPDL3BQ92485 455 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 OMA1Q96E52 524 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 SGTBQ96EQ0 304 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 SENP5Q96HI0 755 aaPredicted RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 MED18Q9BUE0 208 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 GTPBP2Q9BX10 602 aaKnown RBP12.55□□□□□ -0.4
SRSF1-205ENST00000582730 THADAQ6YHU6 1953 aa12.55□□□□□ -0.4
SRSF1-205ENST00000582730 E9PI62 339 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 GTPBP1O00178 669 aaKnown RBP12.54□□□□□ -0.4
SRSF1-205ENST00000582730 MAGEB4O15481 346 aaPredicted RBP12.54□□□□□ -0.4
SRSF1-205ENST00000582730 PTP4A3O75365 173 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 SBK2P0C263 348 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 ZNF141Q15928 474 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 TOR2AQ5JU69 321 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 VASNQ6EMK4 673 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 ARHGAP11AQ6P4F7 1023 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 MED25Q71SY5 747 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 LSMEM1Q8N8F7 131 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 C19orf18Q8NEA5 215 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 OR5W2Q8NH69 310 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 HOXB13Q92826 284 aaPredicted RBP12.54□□□□□ -0.4
SRSF1-205ENST00000582730 TSLPQ969D9 159 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 ZDHHC12Q96GR4 267 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 GFM1Q96RP9 751 aaKnown RBP12.54□□□□□ -0.4
SRSF1-205ENST00000582730 KLHL1Q9NR64 748 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 ASXL3Q9C0F0 2248 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 MCIDASD6RGH6 385 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 TSC22D2O75157 780 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 TRIM3O75382 744 aaPredicted RBP12.54□□□□□ -0.4
SRSF1-205ENST00000582730 SCO1O75880 301 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 MT-ND5P03915 603 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 HIST1H1CP16403 213 aaKnown RBP12.54□□□□□ -0.4
SRSF1-205ENST00000582730 PSMD4P55036 377 aaKnown RBP12.54□□□□□ -0.4
SRSF1-205ENST00000582730 OR12D2P58182 307 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 IDNKQ5T6J7 187 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 FAM27D1Q5T7N8 215 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 TRIQKQ629K1 86 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 CD200R1LQ6Q8B3 271 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 ARIH2OSQ8N7S6 290 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 FAM174AQ8TBP5 190 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 UPRTQ96BW1 309 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 DNAJA3Q96EY1 480 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 CUTCQ9NTM9 273 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 RBFOX1Q9NWB1 397 aaKnown RBP12.54□□□□□ -0.4
SRSF1-205ENST00000582730 PRODH2Q9UF12 536 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
SRSF1-205ENST00000582730 PCDH15Q96QU1 1955 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 FAM240BA0A1B0GVZ2 78 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 CDC14CA4D256 554 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 RGS9O75916 674 aaPredicted RBP12.53□□□□□ -0.4
SRSF1-205ENST00000582730 NDUFB2O95178 105 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 IFI6P09912 130 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 SLC2A2P11168 524 aaPredicted RBP12.53□□□□□ -0.4
SRSF1-205ENST00000582730 PYCR1P32322 319 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 RBM34P42696 430 aaKnown RBP12.53□□□□□ -0.4
SRSF1-205ENST00000582730 GPR143P51810 404 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 IL18Q14116 193 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 GALEQ14376 348 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 C14orf28Q4W4Y0 310 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 CNIH2Q6PI25 160 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 DNAJA4Q8WW22 397 aaPredicted RBP12.53□□□□□ -0.4
SRSF1-205ENST00000582730 ADGRL4Q9HBW9 690 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 RNF215Q9Y6U7 377 aa12.53□□□□□ -0.4
SRSF1-205ENST00000582730 J3QRE1 110 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms