RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 IDUAP35475 653 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 PCYT1AP49585 367 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 RGS8P57771 180 aaPredicted RBP16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 SLC35A1P78382 337 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 OR7A5Q15622 319 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 BEND4Q6ZU67 534 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 SLC30A8Q8IWU4 369 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 LSMEM1Q8N8F7 131 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 OR4D11Q8NGI4 311 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 NSRP1Q9H0G5 558 aaKnown RBP16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 RASSF1Q9NS23 344 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 CMTM6Q9NX76 183 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 RPS6KB2Q9UBS0 482 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 NDRG3Q9UGV2 375 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 PRSS50Q9UI38 385 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 SLC13A4Q9UKG4 626 aa16.57■□□□□ 0.24
PPP4R1-215ENST00000580182 FREM1Q5H8C1 2179 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 LIPT2A6NK58 231 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 ZNF724A8MTY0 619 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 DNPH1O43598 174 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 NPIPB7O75200 414 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 AKR7A3O95154 331 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 LGI1O95970 557 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 NTF4P34130 210 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 EGR4Q05215 589 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 PDK3Q15120 406 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 POU4F3Q15319 338 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 OR1Q1Q15612 314 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 TSC22D1Q15714 1073 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 NPTX1Q15818 432 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 C1orf140Q5VVS0 124 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 CCDC80Q76M96 950 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 PATL1Q86TB9 770 aaKnown RBP16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 STK32CQ86UX6 486 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 CXorf67Q86X51 503 aaPredicted RBP16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 RBM45Q8IUH3 476 aaKnown RBP16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 TMEM99Q8N816 258 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 BHLHE22Q8NFJ8 381 aaPredicted RBP16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 ZC3HAV1LQ96H79 300 aaKnown RBP16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 ARHGDIGQ99819 225 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 TACO1Q9BSH4 297 aaKnown RBP16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 POLDIP3Q9BY77 421 aaKnown RBP16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 TRIM2Q9C040 744 aa16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 TESQ9UGI8 421 aaKnown RBP16.56■□□□□ 0.24
PPP4R1-215ENST00000580182 IGKV3D-15A0A087WSY6 115 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 ELOA3DA6NLF2 546 aaPredicted RBP16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 GPIP06744 558 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 OR3A2P47893 321 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 NRF1Q16656 503 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 ELOA3BQ3SY89 546 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 ALG10BQ5I7T1 473 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 INTS11Q5TA45 600 aaKnown RBP16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 C6orf89Q6UWU4 347 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 GALNT5Q7Z7M9 940 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 P3H2Q8IVL5 708 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 GABRG1Q8N1C3 465 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 ELOA3Q8NG57 546 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 OR6T1Q8NGN1 323 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 VANGL1Q8TAA9 524 aaPredicted RBP16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 PIGXQ8TBF5 258 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 STK35Q8TDR2 534 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 SLC26A7Q8TE54 656 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 KTI12Q96EK9 354 aaPredicted RBP16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 NAA11Q9BSU3 229 aaPredicted RBP16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 MED18Q9BUE0 208 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 PTDSS2Q9BVG9 487 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 CLEC4MQ9H2X3 399 aaPredicted RBP16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 ADPRHL2Q9NX46 363 aa16.55■□□□□ 0.24
PPP4R1-215ENST00000580182 IGKV1D-42A0A075B6H8 117 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 FAM220BPB1ANY3 271 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 SIAH2O43255 324 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 EIF1BO60739 113 aaKnown RBP16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 ADAP00813 363 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 PTNP21246 168 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 RPS5P46782 204 aaKnown RBP16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 SLC16A1P53985 500 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 NCALDP61601 193 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 OTUD3Q5T2D3 398 aaPredicted RBP16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 PAQR6Q6TCH4 344 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 SLC15A3Q8IY34 581 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 RNF217Q8TC41 542 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 MCHR1Q99705 422 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 TAPBPLQ9BX59 468 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 LIME1Q9H400 295 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 TMEM27Q9HBJ8 222 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 EMC3Q9P0I2 261 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 C6orf203Q9P0P8 240 aaPredicted RBP16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 NOSIPQ9Y314 301 aaKnown RBP16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 POLQO75417 2590 aa16.54■□□□□ 0.24
PPP4R1-215ENST00000580182 A0A0B4J2E0 115 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 A0A1B0GX12 115 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 FTCDNL1E5RQL4 147 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 CASKO14936 926 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 IGHV3-9P01782 118 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 HRGP04196 525 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 THBDP07204 575 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 C8BP07358 591 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 TNFRSF1BP20333 461 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 P2RY4P51582 365 aa16.53■□□□□ 0.24
PPP4R1-215ENST00000580182 CDH12P55289 794 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms