RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-215	ENST00000573550	CLDN19	Q8N6F1	224 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	SLC38A9	Q8NBW4	561 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	ZNF540	Q8NDQ6	660 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	GPR26	Q8NDV2	337 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	OR4C15	Q8NGM1	316 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	MCFD2	Q8NI22	146 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	NDNF	Q8TB73	568 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	CNIH3	Q8TBE1	160 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	UTP15	Q8TED0	518 aa	Known RBP	4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	ZFP90	Q8TF47	636 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	SNRNP27	Q8WVK2	155 aa	Known RBP	4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	APH1B	Q8WW43	257 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	GEMIN6	Q8WXD5	167 aa	Known RBP	4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	PIK3R3	Q92569	461 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	LGALS12	Q96DT0	336 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	ABHD8	Q96I13	439 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	TSSK3	Q96PN8	268 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	INPP5K	Q9BT40	448 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	COPS4	Q9BT78	406 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	TBCD	Q9BTW9	1192 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	ZSCAN5A	Q9BUG6	496 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	DCSTAMP	Q9H295	470 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	RIBC2	Q9H4K1	309 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	TPT1P8	Q9HAU6	139 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	MYNN	Q9NPC7	610 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	PDP1	Q9P0J1	537 aa	Predicted RBP	4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	KLHL9	Q9P2J3	617 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	ANKMY1	Q9P2S6	941 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	ERVK-18	Q9QC07	812 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	SPAST	Q9UBP0	616 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	RNF6	Q9Y252	685 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	TRAPPC4	Q9Y296	219 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	TDRKH	Q9Y2W6	561 aa	Known RBP	4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	LYVE1	Q9Y5Y7	322 aa		4.37	□□□□□ -1.71
CDC27-215	ENST00000573550	ALPK3	Q96L96	1907 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	MUC22	E2RYF6	1773 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PGPEP1L	A6NFU8	196 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PTGES3L	E9PB15	166 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550		H3BQ06	376 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	ADAM12	O43184	909 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	AIRE	O43918	545 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	KRT75	O95678	551 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	POP4	O95707	220 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	FADS2	O95864	444 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	LGI1	O95970	557 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	IGHV4-39	P01824	125 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CD36	P16671	472 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CBL	P22681	906 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	LHCGR	P22888	699 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	HOXD10	P28358	340 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	FMO3	P31513	532 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	S100A5	P33763	92 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	SOX6	P35712	828 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	AHR	P35869	848 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CDKN2C	P42773	168 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	XCR1	P46094	333 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	TMED10	P49755	219 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CLK1	P49759	484 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CRYBA2	P53672	197 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PFN3	P60673	137 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CDC42	P60953	191 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	DCAF7	P61962	342 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	RPP38	P78345	283 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	IRF8	Q02556	426 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CHIT1	Q13231	466 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PPIG	Q13427	754 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	6e-8	■■■□□ 16.4
CDC27-215	ENST00000573550	RBM39	Q14498	530 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	NDUFA9	Q16795	377 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PCGF3	Q3KNV8	242 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	BCL7A	Q4VC05	210 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PAGE2B	Q5JRK9	111 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	SLC25A30	Q5SVS4	291 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	GCNT6	Q5T4J0	391 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	HENMT1	Q5T8I9	393 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	CPTP	Q5TA50	214 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	MEDAG	Q5VYS4	303 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	FAAH2	Q6GMR7	532 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	OR4F3	Q6IEY1	312 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	GSG1L	Q6UXU4	331 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	AHSA2	Q719I0	299 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	AKAP14	Q86UN6	197 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	TRIM69	Q86WT6	500 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	TMEM173	Q86WV6	379 aa	Predicted RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PM20D2	Q8IYS1	436 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	SLC22A15	Q8IZD6	547 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	SLC39A11	Q8N1S5	342 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	C10orf111	Q8N326	155 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	LINC00471	Q8N535	108 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	DBF4B	Q8NFT6	615 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	OR10G2	Q8NGC3	310 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	OR8K5	Q8NH50	307 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PSMA8	Q8TAA3	256 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	WFDC5	Q8TCV5	224 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	MRPS31	Q92665	395 aa	Known RBP	4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	UBE2E3	Q969T4	207 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	PHF21A	Q96BD5	680 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	TMCO6	Q96DC7	493 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	ELMOD3	Q96FG2	381 aa		4.36	□□□□□ -1.71
CDC27-215	ENST00000573550	B3GALT6	Q96L58	329 aa		4.36	□□□□□ -1.71

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