RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 R3HCC1LQ7Z5L2 792 aaKnown RBP7.47□□□□□ -1.21
SMG1-216ENST00000569122 RETREG3Q86VR2 466 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 SLC22A9Q8IVM8 553 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 CDK20Q8IZL9 346 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 SLC35F6Q8N357 371 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 NATD1Q8N6N6 113 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 ANKK1Q8NFD2 765 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 CDS1Q92903 461 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 MRRFQ96E11 262 aaKnown RBP7.47□□□□□ -1.21
SMG1-216ENST00000569122 AURKBQ96GD4 344 aaPredicted RBP7.47□□□□□ -1.21
SMG1-216ENST00000569122 C16orf58Q96GQ5 468 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 CCT8L2Q96SF2 557 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 ERP44Q9BS26 406 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 CCDC106Q9BWC9 280 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 QRSL1Q9H0R6 528 aaKnown RBP7.47□□□□□ -1.21
SMG1-216ENST00000569122 TPK1Q9H3S4 243 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 ZNF385DQ9H6B1 395 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 REEP4Q9H6H4 257 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 ZNF665Q9H7R5 613 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 RNF14Q9UBS8 474 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 ZNF346Q9UL40 294 aaKnown RBP7.47□□□□□ -1.21
SMG1-216ENST00000569122 POLR3HQ9Y535 204 aaPredicted RBP7.47□□□□□ -1.21
SMG1-216ENST00000569122 MMP24Q9Y5R2 645 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 NOX1Q9Y5S8 564 aa7.47□□□□□ -1.21
SMG1-216ENST00000569122 NPIPB9F8W1W9 429 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 SCAMP2O15127 329 aaKnown RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 ZNF208O43345 1280 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 PLPP2O43688 288 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 SEC22BO75396 215 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 CRCPO75575 148 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 VAMP5O95183 116 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 CSTAP01040 98 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 KNG1P01042 644 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 AVPP01185 164 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 RNASE1P07998 156 aaKnown RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 INHBAP08476 426 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 IMPDH1P20839 514 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 COL8A2P25067 703 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 CALCRP30988 508 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 FRKP42685 505 aaPredicted RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 HTR6P50406 440 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 SERPINB9P50453 376 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 SELENOVP59797 346 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 NDUFAF6Q330K2 333 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 TEX35Q5T0J7 233 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMG1-216ENST00000569122 OTUD3Q5T2D3 398 aaPredicted RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 LRRC8AQ8IWT6 810 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 GSPT2Q8IYD1 628 aaKnown RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 SIGLECL1Q8N7X8 197 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 OR56A1Q8NGH5 318 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 RNF217Q8TC41 542 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 BCL2L2Q92843 193 aaPredicted RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 POP5Q969H6 163 aaKnown RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 UBE2FQ969M7 185 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 MOAP1Q96BY2 351 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 LRRC58Q96CX6 371 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 MTERF3Q96E29 417 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 FAM120BQ96EK7 910 aaKnown RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 ZNF275Q9NSD4 429 aaPredicted RBP7.46□□□□□ -1.22
SMG1-216ENST00000569122 PRDM4Q9UKN5 801 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 SLC35A3Q9Y2D2 325 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 ARFGEF3Q5TH69 2177 aa7.46□□□□□ -1.22
SMG1-216ENST00000569122 PPIAL4EA0A075B759 164 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 PPIAL4CA0A0B4J2A2 164 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 IGHV2OR16-5A0A0B4J2B6 119 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 PPIAL4DF5H284 164 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 STX11O75558 287 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 LGI1O95970 557 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 HPXP02790 462 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 UBTFL6P0CB48 400 aaPredicted RBP7.45□□□□□ -1.22
SMG1-216ENST00000569122 PPIAL4FP0DN26 164 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 NR4A1P22736 598 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 RPL3P39023 403 aaKnown RBP7.45□□□□□ -1.22
SMG1-216ENST00000569122 RAD52P43351 418 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 MAGEA12P43365 314 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 ASMTP46597 345 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 MTNR1AP48039 350 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 CCT3P49368 545 aaKnown RBP7.45□□□□□ -1.22
SMG1-216ENST00000569122 PLTPP55058 493 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 SKP2Q13309 424 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 SNTB2Q13425 540 aaKnown RBP7.45□□□□□ -1.22
SMG1-216ENST00000569122 ZNF141Q15928 474 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 LSM12Q3MHD2 195 aaKnown RBP7.45□□□□□ -1.22
SMG1-216ENST00000569122 SPDYE7PQ495Y7 208 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 UNC50Q53HI1 259 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 PDZK1Q5T2W1 519 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 TMEM225Q6GV28 225 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 LCA5Q86VQ0 697 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 OR9K2Q8NGE7 335 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 DVL3Q92997 716 aaPredicted RBP7.45□□□□□ -1.22
SMG1-216ENST00000569122 CIDECQ96AQ7 238 aaPredicted RBP7.45□□□□□ -1.22
SMG1-216ENST00000569122 TIMD4Q96H15 378 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 MS4A3Q96HJ5 214 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 CCT7Q99832 543 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 RSPO3Q9BXY4 272 aaPredicted RBP7.45□□□□□ -1.22
SMG1-216ENST00000569122 BEX1Q9HBH7 125 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 CRLF2Q9HC73 371 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 CTPS2Q9NRF8 586 aa7.45□□□□□ -1.22
SMG1-216ENST00000569122 PLEK2Q9NYT0 353 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms