RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 DEPDC4Q8N2C3 294 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 CLIP4Q8N3C7 705 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 C11orf65Q8NCR3 313 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 HIPK4Q8NE63 616 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 NFKBIDQ8NI38 313 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 DNAJA4Q8WW22 397 aaPredicted RBP9.2□□□□□ -0.94
UBR1-207ENST00000568782 ZNF524Q96C55 264 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 PLPPR2Q96GM1 343 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 ZNF300Q96RE9 604 aaPredicted RBP9.2□□□□□ -0.94
UBR1-207ENST00000568782 SF3B5Q9BWJ5 86 aaKnown RBP9.2□□□□□ -0.94
UBR1-207ENST00000568782 TRIM2Q9C040 744 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 TMEM38AQ9H6F2 299 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 TMEM27Q9HBJ8 222 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 ADPRHL2Q9NX46 363 aa9.2□□□□□ -0.94
UBR1-207ENST00000568782 CCDC168Q8NDH2 2452 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 IGKV3D-15A0A087WSY6 115 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 OR2T1O43869 369 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 GCM2O75603 506 aaPredicted RBP9.19□□□□□ -0.94
UBR1-207ENST00000568782 LYZL6O75951 148 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 NUDT7P0C024 238 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 PNMTP11086 282 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 ACAA2P42765 397 aaKnown RBP9.19□□□□□ -0.94
UBR1-207ENST00000568782 SLC16A1P53985 500 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 NKX6-1P78426 367 aaPredicted RBP9.19□□□□□ -0.94
UBR1-207ENST00000568782 FAPQ12884 760 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 PPA1Q15181 289 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 TIMM23BQ5SRD1 257 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 INTS11Q5TA45 600 aaKnown RBP9.19□□□□□ -0.94
UBR1-207ENST00000568782 C1orf140Q5VVS0 124 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 SHEQ5VZ18 495 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 ABLIM2Q6H8Q1 611 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 KLHL17Q6TDP4 642 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 KLHL24Q6TFL4 600 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 ZNF704Q6ZNC4 412 aaPredicted RBP9.19□□□□□ -0.94
UBR1-207ENST00000568782 SERPINA11Q86U17 422 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 TGIF2LYQ8IUE0 185 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 ARMC8Q8IUR7 673 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 CCDC103Q8IW40 242 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 PCYOX1LQ8NBM8 494 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 OR52E4Q8NGH9 312 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 STK35Q8TDR2 534 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 TMEM171Q8WVE6 324 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 RASSF5Q8WWW0 418 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 CGREF1Q99674 301 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 PIP5K1AQ99755 562 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 TMEM120AQ9BXJ8 343 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 CXXC4Q9H2H0 198 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 CXorf56Q9H5V9 222 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 PIF1Q9H611 641 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 MED4Q9NPJ6 270 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 TAS2R16Q9NYV7 291 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 SLC25A37Q9NYZ2 338 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 SLAMF8Q9P0V8 285 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 PRSS50Q9UI38 385 aa9.19□□□□□ -0.94
UBR1-207ENST00000568782 POLQO75417 2590 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 OR6C65A6NJZ3 312 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 ZNF814B7Z6K7 855 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 CLOCKO15516 846 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 TMCC2O75069 709 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 ADAM11O75078 769 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 SASH3O75995 380 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 AKR7A3O95154 331 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 CD53P19397 219 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 KLK2P20151 261 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 PRRC2AP48634 2157 aaKnown RBP9.18□□□□□ -0.94
UBR1-207ENST00000568782 RGS8P57771 180 aaPredicted RBP9.18□□□□□ -0.94
UBR1-207ENST00000568782 H3F3AP84243 136 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 IL1RL1Q01638 556 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 TSC22D1Q15714 1073 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 TAB1Q15750 504 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 MAPK11Q15759 364 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 RUNDC3AQ59EK9 446 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 ALG10BQ5I7T1 473 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 ULK3Q6PHR2 472 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 DHRS4L2Q6PKH6 230 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 AAED1Q7RTV5 226 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 CSMD2Q7Z408 3487 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 NET1Q7Z628 596 aaPredicted RBP9.18□□□□□ -0.94
UBR1-207ENST00000568782 DPP10Q8N608 796 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 SLC38A4Q969I6 547 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 SLC25A36Q96CQ1 311 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 SLC47A1Q96FL8 570 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 ANKRD27Q96NW4 1050 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 EPYCQ99645 322 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 ECSITQ9BQ95 431 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 C12orf10Q9HB07 376 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 FAIMQ9NVQ4 179 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 GID8Q9NWU2 228 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 TESQ9UGI8 421 aaKnown RBP9.18□□□□□ -0.94
UBR1-207ENST00000568782 RASD1Q9Y272 281 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 RNF115Q9Y4L5 304 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 GMEB1Q9Y692 573 aa9.18□□□□□ -0.94
UBR1-207ENST00000568782 ZC3H12DA2A288 527 aaKnown RBP9.17□□□□□ -0.94
UBR1-207ENST00000568782 LIPT2A6NK58 231 aa9.17□□□□□ -0.94
UBR1-207ENST00000568782 AQP7P3A6NL99 342 aa9.17□□□□□ -0.94
UBR1-207ENST00000568782 ZNF716A6NP11 495 aa9.17□□□□□ -0.94
UBR1-207ENST00000568782 BBIP1A8MTZ0 92 aa9.17□□□□□ -0.94
UBR1-207ENST00000568782 KLF4O43474 513 aa9.17□□□□□ -0.94
UBR1-207ENST00000568782 AKAP8O43823 692 aaKnown RBP9.17□□□□□ -0.94
UBR1-207ENST00000568782 RAD51DO75771 328 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms