RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SORCS2Q96PQ0 1159 aa13.57□□□□□ -0.24
NME3-211ENST00000568561 DCTN4Q9UJW0 460 aa13.57□□□□□ -0.24
NME3-211ENST00000568561 TRAPPC4Q9Y296 219 aa13.57□□□□□ -0.24
NME3-211ENST00000568561 SLC35F4A4IF30 521 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 TYROBPO43914 113 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 AKR7A3O95154 331 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 GUSBP08236 651 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
NME3-211ENST00000568561 CASP8Q14790 479 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 CHI3L2Q15782 390 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 FAM174BQ3ZCQ3 159 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 OTUD3Q5T2D3 398 aaPredicted RBP13.56□□□□□ -0.24
NME3-211ENST00000568561 ANXA8L1Q5VT79 327 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 C17orf78Q8N4C9 275 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 TMEM99Q8N816 258 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 ANKS4BQ8N8V4 417 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 C1orf162Q8NEQ5 155 aaPredicted RBP13.56□□□□□ -0.24
NME3-211ENST00000568561 PNPT1Q8TCS8 783 aaKnown RBP13.56□□□□□ -0.24
NME3-211ENST00000568561 DDIT4LQ96D03 193 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 ZNF385AQ96PM9 386 aaKnown RBP13.56□□□□□ -0.24
NME3-211ENST00000568561 NAA11Q9BSU3 229 aaPredicted RBP13.56□□□□□ -0.24
NME3-211ENST00000568561 C20orf27Q9GZN8 174 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 SLC38A1Q9H2H9 487 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 TMEM160Q9NX00 188 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 PMF1-BGLAPU3KQ54 211 aa13.56□□□□□ -0.24
NME3-211ENST00000568561 AGAP5A6NIR3 686 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 LMX1BO60663 402 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 EIF1BO60739 113 aaKnown RBP13.55□□□□□ -0.24
NME3-211ENST00000568561 F12P00748 615 aaPredicted RBP13.55□□□□□ -0.24
NME3-211ENST00000568561 GSNP06396 782 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 CSF3P09919 207 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 MPGP29372 298 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 APOBEC3AP31941 199 aaPredicted RBP13.55□□□□□ -0.24
NME3-211ENST00000568561 CDKN2CP42773 168 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 HTR3AP46098 478 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 LSM11P83369 360 aaKnown RBP eCLIP13.55□□□□□ -0.24
NME3-211ENST00000568561 TGFBR3Q03167 851 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 CEACAM7Q14002 265 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 OR7A5Q15622 319 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 SMU1Q2TAY7 513 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 MST1LQ2TV78 715 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 KLHL24Q6TFL4 600 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 AAED1Q7RTV5 226 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 GPAT4Q86UL3 456 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 ZIC4Q8N9L1 334 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 OR9K2Q8NGE7 335 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 WDR60Q8WVS4 1066 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 OIT3Q8WWZ8 545 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 PROX1Q92786 737 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 TESCQ96BS2 214 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 TEX37Q96LM6 180 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 PRR14Q9BWN1 585 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 NUF2Q9BZD4 464 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 PARPBPQ9NWS1 579 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 LPAR3Q9UBY5 353 aa13.55□□□□□ -0.24
NME3-211ENST00000568561 IGHV1-18A0A0C4DH31 117 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 LOC100289279A0A1B0GTE1 492 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 VWC2LB2RUY7 222 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 E9PBE3 544 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 ZNF208O43345 1280 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 LGI1O95970 557 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 SERPINE1P05121 402 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 GKN3PP0CG01 181 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 BMP4P12644 408 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 SRD5A1P18405 259 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 FKBP2P26885 142 aaKnown RBP13.54□□□□□ -0.24
NME3-211ENST00000568561 SLC1A3P43003 542 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 PDLIM4P50479 330 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 PRPS1P60891 318 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
NME3-211ENST00000568561 VSNL1P62760 191 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 TUBA1BP68363 451 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 TUBA4AP68366 448 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 BNIP2Q12982 314 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 SWI5Q1ZZU3 235 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 COX20Q5RI15 118 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 MRPL2Q5T653 305 aaKnown RBP13.54□□□□□ -0.24
NME3-211ENST00000568561 AP1ARQ63HQ0 302 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 PAQR6Q6TCH4 344 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 TUBA1AQ71U36 451 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 VPS37AQ8NEZ2 397 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 TMEM45BQ96B21 275 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 ZBTB9Q96C00 473 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 MSI2Q96DH6 328 aaKnown RBP13.54□□□□□ -0.24
NME3-211ENST00000568561 AURKBQ96GD4 344 aaPredicted RBP13.54□□□□□ -0.24
NME3-211ENST00000568561 CCDC115Q96NT0 180 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 ZIM3Q96PE6 472 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 ALKBH3Q96Q83 286 aaPredicted RBP13.54□□□□□ -0.24
NME3-211ENST00000568561 SORT1Q99523 831 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 VRK1Q99986 396 aaPredicted RBP13.54□□□□□ -0.24
NME3-211ENST00000568561 PIMREGQ9BSJ6 248 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 C19orf24Q9BVV8 132 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 SEC61A2Q9H9S3 476 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 RLIMQ9NVW2 624 aa13.54□□□□□ -0.24
NME3-211ENST00000568561 IGHV4-61A0A0C4DH41 118 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 CFAP73A6NFT4 308 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 LIPT2A6NK58 231 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 WNT11O96014 354 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 MYZAPP0CAP1 466 aa13.53□□□□□ -0.24
NME3-211ENST00000568561 RPS4Y1P22090 263 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms