RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ARHGAP42A6NI28 874 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 NDUFS8O00217 210 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 HDAC3O15379 428 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 ASS1P00966 412 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 JCHAINP01591 159 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 IGHV3-23P01764 117 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 CHRNA1P02708 482 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 RPS17P08708 135 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 ZP3P21754 424 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 PSMA2P25787 234 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 PTBP1P26599 531 aaKnown RBP eCLIP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 PRKAR2BP31323 418 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 CBX5P45973 191 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 HAAOP46952 286 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 RGRP47804 291 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 NUMBP49757 651 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 GDI2P50395 445 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 KLHL30Q0D2K2 578 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 GAMTQ14353 236 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 MXD4Q14582 209 aaPredicted RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 PRR4Q16378 134 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 RGS21Q2M5E4 152 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 SMUG1Q53HV7 270 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 BEND6Q5SZJ8 279 aaPredicted RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 PDPK2PQ6A1A2 396 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 TMEM53Q6P2H8 277 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 MIER3Q7Z3K6 550 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 CTAGE6Q86UF2 777 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 ZNF540Q8NDQ6 660 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 SLC22A8Q8TCC7 542 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 U2AF1L4Q8WU68 220 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 MCHR2Q969V1 340 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 SLC25A38Q96DW6 304 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 FAM122AQ96E09 287 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 C19orf60Q96EN9 201 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 CHMP6Q96FZ7 201 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 CNDP1Q96KN2 507 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 NSMCE2Q96MF7 247 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 MAPKAP1Q9BPZ7 522 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 WRAP53Q9BUR4 548 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 C6orf62Q9GZU0 229 aaPredicted RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 VCXQ9H320 206 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 HAUS4Q9H6D7 363 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 AZI2Q9H6S1 392 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 LRRC19Q9H756 370 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 GPN2Q9H9Y4 310 aaPredicted RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 DIABLOQ9NR28 239 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 FARSBQ9NSD9 589 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 KLRF1Q9NZS2 232 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 BCAP29Q9UHQ4 241 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 KLHL21Q9UJP4 597 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 DDX19BQ9UMR2 479 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 ABCG2Q9UNQ0 655 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 FADS3Q9Y5Q0 445 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 BZW2Q9Y6E2 419 aaKnown RBP2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 BRCA2P51587 3418 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 PCDH11XQ9BZA7 1347 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 LAMA3Q16787 3333 aa2.67□□□□□ -1.98
HERPUD1-212ENST00000567944 SIPA1L3O60292 1781 aaPredicted RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 A0A1W2PP64 1363 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 C1orf232A0A0U1RR37 186 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 TTC26A0AVF1 554 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 SNTNA6NMZ2 147 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 GPR89AB7ZAQ6 455 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 GOLGA8KD6RF30 607 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 GOLGA8TH3BQL2 631 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 GOLGA8MH3BSY2 632 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 KMOO15229 486 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 RIPK2O43353 540 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 NIPSNAP2O75323 286 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 FLOT1O75955 427 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 LCA5LO95447 670 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 HLA-DRAP01903 254 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 HSPB1P04792 205 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 HMGN1P05114 100 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 IGFBP1P08833 259 aaPredicted RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 GPR89BP0CG08 455 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 GOLGA8HP0CJ92 632 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PNMA6AP0CW24 399 aaPredicted RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CLUP10909 449 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 POU2F1P14859 743 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 ELK1P19419 428 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 FUT1P19526 365 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PRKACBP22694 351 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 ANXA13P27216 316 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PBLDP30039 288 aaPredicted RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 HMOX2P30519 316 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 AXLP30530 894 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 CDH5P33151 784 aaPredicted RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 RPL4P36578 427 aaKnown RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 NUP62P37198 522 aaPredicted RBP2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 HTR5AP47898 357 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 RAP1GDS1P52306 607 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 AP3M2P53677 418 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 PLTPP55058 493 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 MTTPP55157 894 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 LIM2P55344 173 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 TFDP1Q14186 410 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 GNA13Q14344 377 aa2.66□□□□□ -1.98
HERPUD1-212ENST00000567944 NCF4Q15080 339 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms