RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 ZNF629Q9UEG4 869 aaPredicted RBP10.91□□□□□ -0.66
SF3B3-208ENST00000567250 RNF6Q9Y252 685 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 MED12LQ86YW9 2145 aa10.91□□□□□ -0.66
SF3B3-208ENST00000567250 A0A087WUJ7 227 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 A0A0G2JNJ9 132 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 WIPF3A6NGB9 483 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 TPST2O60704 377 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 TGM6O95932 706 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 IL18BPO95998 194 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 CTSSP25774 331 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 CDH12P55289 794 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 ST3GAL3Q11203 375 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 MFSD13AQ14CX5 517 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 SLC25A35Q3KQZ1 300 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 FAM69AQ5T7M9 428 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 TTC33Q6PID6 262 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-208ENST00000567250 SEM1Q6ZVN7 128 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 NCCRP1Q6ZVX7 275 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-208ENST00000567250 FCRLAQ7L513 359 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 RBM45Q8IUH3 476 aaKnown RBP10.9□□□□□ -0.66
SF3B3-208ENST00000567250 OFCC1Q8IZS5 231 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 PIGXQ8TBF5 258 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 RNF128Q8TEB7 428 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 ITLN2Q8WWU7 325 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-208ENST00000567250 LRRC46Q96FV0 321 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 SLC41A3Q96GZ6 507 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 PYURFQ96I23 114 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 GMPPAQ96IJ6 420 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-208ENST00000567250 ARL5BQ96KC2 179 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 WFDC6Q9BQY6 131 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 NAA11Q9BSU3 229 aaPredicted RBP10.9□□□□□ -0.66
SF3B3-208ENST00000567250 SRXN1Q9BYN0 137 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 SLC19A3Q9BZV2 496 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 GP6Q9HCN6 339 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 EMC3Q9P0I2 261 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 KLHL9Q9P2J3 617 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 Q9UFV3 132 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 SLC7A7Q9UM01 511 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 EMC9Q9Y3B6 208 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 FAM32AQ9Y421 112 aaKnown RBP10.9□□□□□ -0.66
SF3B3-208ENST00000567250 V9GYQ6 96 aa10.9□□□□□ -0.66
SF3B3-208ENST00000567250 TRAV36DV7A0A075B6V5 113 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 ZC3H12DA2A288 527 aaKnown RBP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 SMAD9O15198 467 aaKnown RBP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 NPIPB7O75200 414 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 PRKD3O94806 890 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 TOXO94900 526 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 CLDN14O95500 239 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 HOXB6P17509 224 aaKnown RBP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 MSX2P35548 267 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 RBM34P42696 430 aaKnown RBP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 CTBP2P56545 445 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 OR2B6P58173 313 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 SRSF1Q07955 248 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 TRAP1Q12931 704 aaKnown RBP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 PAQR6Q6TCH4 344 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 GCNT2Q8N0V5 402 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 NAXEQ8NCW5 288 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 OR6S1Q8NH40 331 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 MFSD8Q8NHS3 518 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 INTS12Q96CB8 462 aaKnown RBP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 FNDC11Q9BVV2 318 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 PRR14Q9BWN1 585 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 KLHL4Q9C0H6 718 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 LRMDAQ9H2I8 198 aa10.89□□□□□ -0.67
SF3B3-208ENST00000567250 C6orf203Q9P0P8 240 aaPredicted RBP10.89□□□□□ -0.67
SF3B3-208ENST00000567250 LIPT2A6NK58 231 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 KDM4EB2RXH2 506 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-208ENST00000567250 CYTIPO60759 359 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 SS18L1O75177 396 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-208ENST00000567250 AQP8O94778 261 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 MT-ATP6P00846 226 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 FABP3P05413 133 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 ATP6V1B2P21281 511 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 BMP5P22003 454 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 RPS5P46782 204 aaKnown RBP10.88□□□□□ -0.67
SF3B3-208ENST00000567250 AGFG1P52594 562 aaKnown RBP10.88□□□□□ -0.67
SF3B3-208ENST00000567250 PIN1Q13526 163 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-208ENST00000567250 FLOT2Q14254 428 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 OR7A5Q15622 319 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 TMEM201Q5SNT2 666 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 ABLIM2Q6H8Q1 611 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 CYP2R1Q6VVX0 501 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 GDF7Q7Z4P5 450 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 CCDC71Q8IV32 467 aaPredicted RBP10.88□□□□□ -0.67
SF3B3-208ENST00000567250 INTS1Q8N201 2190 aaKnown RBP10.88□□□□□ -0.67
SF3B3-208ENST00000567250 CNEP1R1Q8N9A8 125 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 OR6K3Q8NGY3 331 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 CLPTM1LQ96KA5 538 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 HS6ST2Q96MM7 605 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 AMBRA1Q9C0C7 1298 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 PIGMQ9H3S5 423 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 ANKRD19PQ9H560 264 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 MAGIXQ9H6Y5 334 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 KLHL13Q9P2N7 655 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 RIMS3Q9UJD0 308 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 CORINQ9Y5Q5 1042 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 ENPP4Q9Y6X5 453 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 CACNA1CQ13936 2221 aa10.88□□□□□ -0.67
SF3B3-208ENST00000567250 A0A1W2PNV4 684 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms