RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ARMC7Q9H6L4 198 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 BCO1Q9HAY6 547 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 CACYBPQ9HB71 228 aaKnown RBP12.35□□□□□ -0.43
TPM1-230ENST00000561266 SEC14L4Q9UDX3 406 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 PRSS50Q9UI38 385 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 ADAM21Q9UKJ8 722 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 TRAPPC4Q9Y296 219 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 SPIN1Q9Y657 262 aaPredicted RBP12.35□□□□□ -0.43
TPM1-230ENST00000561266 AKAP6Q13023 2319 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 TACC2O95359 2948 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 CSMD1Q96PZ7 3565 aa12.35□□□□□ -0.43
TPM1-230ENST00000561266 LRBAP50851 2863 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 A8MVM7 634 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 FTCDNL1E5RQL4 147 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 AKR7A3O95154 331 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 C8BP07358 591 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 YES1P07947 543 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 UQCRBP14927 111 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 KDELR2P33947 212 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 CD79BP40259 229 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 GSK3BP49841 420 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 CDH12P55289 794 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 CSNK2A1P68400 391 aaPredicted RBP12.34□□□□□ -0.43
TPM1-230ENST00000561266 TLE4Q04727 773 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 RNPS1Q15287 305 aaKnown RBP12.34□□□□□ -0.43
TPM1-230ENST00000561266 OR7A5Q15622 319 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 TSC22D1Q15714 1073 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 C1orf140Q5VVS0 124 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 ANKRD34AQ69YU3 496 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 SLC30A8Q8IWU4 369 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 FITM2Q8N6M3 262 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 SLC38A4Q969I6 547 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 TAAR8Q969N4 342 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 ZNF559Q9BR84 538 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 GLRX2Q9NS18 164 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 ABCD2Q9UBJ2 740 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 TESQ9UGI8 421 aaKnown RBP12.34□□□□□ -0.43
TPM1-230ENST00000561266 EMC9Q9Y3B6 208 aa12.34□□□□□ -0.43
TPM1-230ENST00000561266 TEX15Q9BXT5 2789 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 IGKV3D-15A0A087WSY6 115 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 ELOVL7A1L3X0 281 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 CPSF4LA6NMK7 179 aaKnown RBP12.33□□□□□ -0.44
TPM1-230ENST00000561266 SIAH2O43255 324 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 FAM107AO95990 144 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 NCK1P16333 377 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 IDUAP35475 653 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 RPS5P46782 204 aaKnown RBP12.33□□□□□ -0.44
TPM1-230ENST00000561266 OR1E2P47887 323 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 SLC25A3Q00325 362 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 CYBRD1Q53TN4 286 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 ALG10BQ5I7T1 473 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 ENTPD8Q5MY95 495 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 INTS11Q5TA45 600 aaKnown RBP12.33□□□□□ -0.44
TPM1-230ENST00000561266 EEF1A1P5Q5VTE0 462 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 FAM91A1Q658Y4 838 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 ERICH5Q6P6B1 374 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 LINC00114Q6XXX2 140 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 STAC2Q6ZMT1 411 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 CARM1Q86X55 608 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 SLC43A2Q8N370 569 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 RNF148Q8N7C7 305 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 ANKS4BQ8N8V4 417 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 ZIC4Q8N9L1 334 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 FAM156AQ8NDB6 213 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 CMTM5Q96DZ9 223 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 C14orf79Q96F83 325 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 WFIKKN1Q96NZ8 548 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 HOPXQ9BPY8 73 aaPredicted RBP12.33□□□□□ -0.44
TPM1-230ENST00000561266 TRIM2Q9C040 744 aa12.33□□□□□ -0.44
TPM1-230ENST00000561266 FOXD3Q9UJU5 478 aaPredicted RBP12.33□□□□□ -0.44
TPM1-230ENST00000561266 SPG11Q96JI7 2443 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 A0A087WUJ7 227 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 FAM221AA4D161 298 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 TUBAL3A6NHL2 446 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 ELOA3DA6NLF2 546 aaPredicted RBP12.32□□□□□ -0.44
TPM1-230ENST00000561266 ZNF724A8MTY0 619 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 LRRN3E7EW58 273 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 POU2F1P14859 743 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 CBLP22681 906 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 FKBP2P26885 142 aaKnown RBP12.32□□□□□ -0.44
TPM1-230ENST00000561266 UGT2B10P36537 528 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 MAP2K6P52564 334 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 SLC16A1P53985 500 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 FOXG1P55316 489 aaPredicted RBP12.32□□□□□ -0.44
TPM1-230ENST00000561266 SLC35A1P78382 337 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 SORDQ00796 357 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 SLC17A1Q14916 467 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 ELOA3BQ3SY89 546 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 LRRC23Q53EV4 343 aaPredicted RBP12.32□□□□□ -0.44
TPM1-230ENST00000561266 TMEM201Q5SNT2 666 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 GTF2IRD2BQ6EKJ0 949 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 ULK3Q6PHR2 472 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 GDF7Q7Z4P5 450 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 ARPINQ7Z6K5 226 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 VTCN1Q7Z7D3 282 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 GTF2IRD2Q86UP8 949 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 GABRG1Q8N1C3 465 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 KDM8Q8N371 416 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 RBM15BQ8NDT2 890 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms