RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ASB9Q96DX5 294 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 SGTBQ96EQ0 304 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 DNAJA3Q96EY1 480 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 PRRC1Q96M27 445 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 UCN2Q96RP3 112 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 OR11A1Q9GZK7 315 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 PCDHAC1Q9H158 963 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 B3GAT2Q9NPZ5 323 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 TMEM5Q9Y2B1 443 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 HRH3Q9Y5N1 445 aa9.61□□□□□ -0.87
TPM1-229ENST00000561242 FRYQ5TBA9 3013 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 A0A0B4J2E0 115 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 A0A0G2JNJ9 132 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 A0A1B0GX12 115 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 A1L4Q6 167 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 OR6C65A6NJZ3 312 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 MCIDASD6RGH6 385 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 ETV2O00321 342 aaPredicted RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 KPNA4O00629 521 aaPredicted RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 KRT36O76013 467 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 WISP2O76076 250 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 GADD45GO95257 159 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 CBLP22681 906 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 ASCL1P50553 236 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 AGFG1P52594 562 aaKnown RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 TGFBR3Q03167 851 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 PIN1Q13526 163 aaPredicted RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 ZNF239Q16600 458 aaKnown RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 EXOC3L2Q2M3D2 409 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 EMC4Q5J8M3 183 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 C8orf82Q6P1X6 216 aaPredicted RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 PAQR6Q6TCH4 344 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 H1FNTQ75WM6 255 aaPredicted RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 NANOGNBQ7Z5D8 188 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 VTCN1Q7Z7D3 282 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 LUZP2Q86TE4 346 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 ZDHHC21Q8IVQ6 265 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 UEVLDQ8IX04 471 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 RNF113BQ8IZP6 322 aaKnown RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 LINC00471Q8N535 108 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 SCAIQ8N9R8 606 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 C9orf106Q8NAJ2 232 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 OR6K3Q8NGY3 331 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 TMEM239Q8WW34 195 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 DMRTA2Q96SC8 542 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 TMEM43Q9BTV4 400 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 SF3B5Q9BWJ5 86 aaKnown RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 RBM24Q9BX46 236 aaKnown RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 TEX12Q9BXU0 123 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 C12orf49Q9H741 205 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 ZNF556Q9HAH1 456 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 STX18Q9P2W9 335 aaKnown RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 Q9UFV3 132 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 CLEC4AQ9UMR7 237 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 EDARQ9UNE0 448 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 USP22Q9UPT9 525 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 B3GALT5Q9Y2C3 310 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
TPM1-229ENST00000561242 ENPP4Q9Y6X5 453 aa9.6□□□□□ -0.87
TPM1-229ENST00000561242 FREM2Q5SZK8 3169 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 EPG5Q9HCE0 2579 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 IGHV3-15A0A0B4J1V0 119 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 A0A1W2PRG6 482 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 CIB4A0PJX0 185 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 H0YC42 278 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 BLOC1S5-TXNDC5H3BN57 136 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 hCG_2039718K7EN88 272 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 MSTNO14793 375 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 GSC2O15499 205 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 RNF13O43567 381 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 ENTPD5O75356 428 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 BCAS1O75363 584 aaPredicted RBP9.59□□□□□ -0.87
TPM1-229ENST00000561242 E2F6O75461 281 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 AKR7A3O95154 331 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 NTN1O95631 604 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 CH25HO95992 272 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 LDLRP01130 860 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 ADORA3P0DMS8 318 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 NR2C1P13056 603 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 POU2F1P14859 743 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 TNFRSF1BP20333 461 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 IL11P20809 199 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 IL32P24001 234 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 CEACAM8P31997 349 aaPredicted RBP9.59□□□□□ -0.87
TPM1-229ENST00000561242 ZNF136P52737 540 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 TPD52P55327 224 aaPredicted RBP9.59□□□□□ -0.87
TPM1-229ENST00000561242 CASP12Q6UXS9 341 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 AAED1Q7RTV5 226 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 GDF7Q7Z4P5 450 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 GGNQ86UU5 652 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 GPR32P1Q8NGA4 272 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 OR6S1Q8NH40 331 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 APH1AQ96BI3 265 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 USB1Q9BQ65 265 aaKnown RBP9.59□□□□□ -0.87
TPM1-229ENST00000561242 PRR14Q9BWN1 585 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 HDHD5Q9BXW7 423 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 ANKRD19PQ9H560 264 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 MAGIXQ9H6Y5 334 aa9.59□□□□□ -0.87
TPM1-229ENST00000561242 REEP1Q9H902 201 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms