RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 INTS1Q8N201 2190 aaKnown RBP13.82□□□□□ -0.2
RABGGTA-219ENST00000560871 MED12LQ86YW9 2145 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 IGKV1D-42A0A075B6H8 117 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 A8MVM7 634 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 ZNF814B7Z6K7 855 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 CXCR6O00574 342 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 THY1P04216 161 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 CD8BP10966 210 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 TNFRSF1BP20333 461 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 IDUAP35475 653 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 CPOXP36551 454 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 SLC25A3Q00325 362 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 RNPS1Q15287 305 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 SWT1Q5T5J6 900 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 ZNF613Q6PF04 617 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 ULK3Q6PHR2 472 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 LUZP2Q86TE4 346 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 SLC43A2Q8N370 569 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 STK35Q8TDR2 534 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 RNASE6Q93091 150 aaKnown RBP13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 SLC38A4Q969I6 547 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 MCHR1Q99705 422 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 KCTD14Q9BQ13 255 aaPredicted RBP13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 PTDSS2Q9BVG9 487 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 BCO1Q9HAY6 547 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 KLHL13Q9P2N7 655 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 RPS6KB2Q9UBS0 482 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 BAG5Q9UL15 447 aa13.81□□□□□ -0.2
RABGGTA-219ENST00000560871 LIPT2A6NK58 231 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 ZNF716A6NP11 495 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 A8MXE2 369 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 FTCDNL1E5RQL4 147 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 MSTNO14793 375 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 RAMP1O60894 148 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 LYPD3O95274 346 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 PLGP00747 810 aaPredicted RBP13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 IFNA14P01570 189 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 T-ENOLP0DO92 83 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 GGT1P19440 569 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 ENTPD8Q5MY95 495 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 GTF2IRD2BQ6EKJ0 949 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 CBLL1Q75N03 491 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 GTF2IRD2Q86UP8 949 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 CARM1Q86X55 608 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 RNF148Q8N7C7 305 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 PROX1Q92786 737 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 NSL1Q96IY1 281 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 TMEM27Q9HBJ8 222 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 KLHL9Q9P2J3 617 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 KCNN3Q9UGI6 736 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 CD300AQ9UGN4 299 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 SLC9A8Q9Y2E8 581 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 SH3GLB1Q9Y371 365 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 EMC9Q9Y3B6 208 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 ABCA12Q86UK0 2595 aa13.8□□□□□ -0.2
RABGGTA-219ENST00000560871 IGKV3D-15A0A087WSY6 115 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 A0A087WUJ7 227 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 ELOA3DA6NLF2 546 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 CPSF4LA6NMK7 179 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 CHP2O43745 196 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 PRKD3O94806 890 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 GPIP06744 558 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 PNMTP11086 282 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 HSD17B1P14061 328 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 FPR1P21462 350 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 CALB2P22676 271 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 CDH12P55289 794 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 OR2B6P58173 313 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 SELENOWP63302 87 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 SLC35A1P78382 337 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 RASGEF1BQ0VAM2 473 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 CEACAM7Q14002 265 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 PDK3Q15120 406 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 ELOA3BQ3SY89 546 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 C1orf140Q5VVS0 124 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 ZNF474Q6S9Z5 364 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 PAQR6Q6TCH4 344 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 C16orf89Q6UX73 402 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 LINC00114Q6XXX2 140 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 TUSC5Q8IXB3 177 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 RBM15BQ8NDT2 890 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 ELOA3Q8NG57 546 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 ADAMTS16Q8TE57 1224 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 ZHX1-C8orf76Q96EF9 292 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 SLC47A1Q96FL8 570 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 ZNF300Q96RE9 604 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 RBM24Q9BX46 236 aaKnown RBP13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 OPN3Q9H1Y3 402 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 SLC24A3Q9HC58 644 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 NDE1Q9NXR1 346 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 GALNT8Q9NY28 637 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 ADA2Q9NZK5 511 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 FOXD3Q9UJU5 478 aaPredicted RBP13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 PROCRQ9UNN8 238 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 CREBBPQ92793 2442 aa13.79□□□□□ -0.2
RABGGTA-219ENST00000560871 EIF1BO60739 113 aaKnown RBP13.78□□□□□ -0.2
RABGGTA-219ENST00000560871 SMNDC1O75940 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
RABGGTA-219ENST00000560871 AHSA1O95433 338 aa13.78□□□□□ -0.2
RABGGTA-219ENST00000560871 NCK1P16333 377 aa13.78□□□□□ -0.2
RABGGTA-219ENST00000560871 CCKARP32238 428 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms