RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 A8MVM7 634 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 DEFB108AA8MXU0 73 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 TMEM229AB2RXF0 380 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 TPST2O60704 377 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 SERPINB7O75635 380 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 PCGF2P35227 344 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 OR3A2P47893 321 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 RBBP4Q09028 425 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 MAPRE2Q15555 327 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 DUSP7Q16829 419 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 OTUD3Q5T2D3 398 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 C1orf140Q5VVS0 124 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 TREML1Q86YW5 311 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 WFDC8Q8IUA0 241 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 LURAP1LQ8IV03 231 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 OR4D11Q8NGI4 311 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 VANGL1Q8TAA9 524 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 PIGXQ8TBF5 258 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 S100PBPQ96BU1 408 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 TAMM41Q96BW9 452 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 SLC13A4Q9UKG4 626 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 TRAPPC4Q9Y296 219 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 PLEKHA6Q9Y2H5 1048 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 PRORSD1PA6NEY8 169 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 ELOA3DA6NLF2 546 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 CCT8L1PA6NM43 557 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 ZNF724A8MTY0 619 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 BBIP1A8MTZ0 92 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 LYZL6O75951 148 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 COX4I1P13073 169 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 CRYGSP22914 178 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 FKBP2P26885 142 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 RPS5P46782 204 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 PCYT1AP49585 367 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 CRYBA2P53672 197 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 H3F3AP84243 136 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 EGR4Q05215 589 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 NPTX1Q15818 432 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 VMACQ2NL98 169 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 ELOA3BQ3SY89 546 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 CALHM3Q86XJ0 350 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 RBM45Q8IUH3 476 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 ZNF100Q8IYN0 542 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 ELOA3Q8NG57 546 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC25A36Q96CQ1 311 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 KTI12Q96EK9 354 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 ECSITQ9BQ95 431 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 TACO1Q9BSH4 297 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 NAA11Q9BSU3 229 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 POTEKPQ9BYX7 375 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 ZNF226Q9NYT6 803 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 SEC14L4Q9UDX3 406 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 NOSIPQ9Y314 301 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 PRR14LQ5THK1 2151 aa13.14□□□□□ -0.31
RABGGTA-211ENST00000559850 CREBBPQ92793 2442 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 IGKV3D-15A0A087WSY6 115 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 AIM2O14862 343 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 DNPH1O43598 174 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 NPIPB7O75200 414 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 AHSA1O95433 338 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 GPIP06744 558 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 TNFRSF1BP20333 461 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 CD247P20963 164 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 DRD4P21917 467 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 CBLP22681 906 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 IL32P24001 234 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 LSP1P33241 339 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 IST1P53990 364 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 FOXG1P55316 489 aaPredicted RBP13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 NCALDP61601 193 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 OR1Q1Q15612 314 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 COQ5Q5HYK3 327 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 PAQR6Q6TCH4 344 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 GPAT4Q86UL3 456 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 UBE2J2Q8N2K1 259 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 KDM8Q8N371 416 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 OR8J3Q8NGG0 315 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 SLC35B4Q969S0 331 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 ARHGDIGQ99819 225 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 PTDSS2Q9BVG9 487 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 TAPBPLQ9BX59 468 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 PLEKHF2Q9H8W4 249 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 TESQ9UGI8 421 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 GPR52Q9Y2T5 361 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 FLVCR1Q9Y5Y0 555 aa13.13□□□□□ -0.31
RABGGTA-211ENST00000559850 OTOGQ6ZRI0 2925 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 IGKV1D-42A0A075B6H8 117 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 AQP7P3A6NL99 342 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 CPSF4LA6NMK7 179 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 EIF1BO60739 113 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 CCDC22O60826 627 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 LGI1O95970 557 aa13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 PSMB1P20618 241 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-211ENST00000559850 IGHV1-2P23083 117 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms