RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ANKRD19PQ9H560 264 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 TMEM185BQ9H7F4 350 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 KCNJ16Q9NPI9 418 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 Q9UFV3 132 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 USP22Q9UPT9 525 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 EMC9Q9Y3B6 208 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 CORINQ9Y5Q5 1042 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 CACNA1CQ13936 2221 aa12.26□□□□□ -0.45
SHMT2-234ENST00000557703 TRAV36DV7A0A075B6V5 113 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 ZNF724A8MTY0 619 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 H0YC42 278 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 M0R3H8 397 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 ARPC2O15144 300 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 TPST2O60704 377 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 CYTIPO60759 359 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 AHSA1O95433 338 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 ZNF682O95780 498 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 TGM6O95932 706 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 PLGP00747 810 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-234ENST00000557703 MT-ATP6P00846 226 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 CDH12P55289 794 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 TPD52P55327 224 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-234ENST00000557703 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 NPTX1Q15818 432 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 FBXL19-AS1Q494R0 122 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 C1orf140Q5VVS0 124 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 POMZP3Q6PJE2 187 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 RINLQ6ZS11 566 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 RPRMLQ8N4K4 120 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 C9orf106Q8NAJ2 232 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 ATP6V1C2Q8NEY4 427 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 PYURFQ96I23 114 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 PRRC1Q96M27 445 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 ZNF426Q9BUY5 554 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 SF3B5Q9BWJ5 86 aaKnown RBP12.25□□□□□ -0.45
SHMT2-234ENST00000557703 TRIM15Q9C019 465 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 BCO1Q9HAY6 547 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 EMC3Q9P0I2 261 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 EGFL7Q9UHF1 273 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 FAM32AQ9Y421 112 aaKnown RBP12.25□□□□□ -0.45
SHMT2-234ENST00000557703 MPDZO75970 2070 aa12.25□□□□□ -0.45
SHMT2-234ENST00000557703 IGKV3D-15A0A087WSY6 115 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 LOC102725191A0A1B0GVB3 256 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 A0A1W2PNR3 127 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 LIPT2A6NK58 231 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 EBAG9O00559 213 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 MSTNO14793 375 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 SS18L1O75177 396 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-234ENST00000557703 DNAJC8O75937 253 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-234ENST00000557703 CNOT4O95628 575 aaKnown RBP12.24□□□□□ -0.45
SHMT2-234ENST00000557703 CD8BP10966 210 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 RHCEP18577 417 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 TCN1P20061 433 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-234ENST00000557703 SHC1P29353 583 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 SLC16A1P53985 500 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 CTBP2P56545 445 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 SMIM11AP58511 58 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 TAS2R41P59536 307 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 HOXC5Q00444 222 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 LCN8Q6JVE9 175 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 TTC33Q6PID6 262 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-234ENST00000557703 DHFR2Q86XF0 187 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 RNF113BQ8IZP6 322 aaKnown RBP12.24□□□□□ -0.45
SHMT2-234ENST00000557703 RNF148Q8N7C7 305 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 ADPRHL1Q8NDY3 354 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 OR6K3Q8NGY3 331 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 MCUR1Q96AQ8 359 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 SLC7A6OSQ96CW6 309 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-234ENST00000557703 ZNF845Q96IR2 970 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-234ENST00000557703 HSH2DQ96JZ2 352 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 ARL5BQ96KC2 179 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 RIMS3Q9UJD0 308 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 PACSIN3Q9UKS6 424 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 B3GALT5Q9Y2C3 310 aa12.24□□□□□ -0.45
SHMT2-234ENST00000557703 A0A1W2PNV4 684 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 AQP8O94778 261 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 YES1P07947 543 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 UMPSP11172 480 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 GTF2E2P29084 291 aaKnown RBP12.23□□□□□ -0.45
SHMT2-234ENST00000557703 ASCL1P50553 236 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 OR2B6P58173 313 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 EGR4Q05215 589 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 TMEM201Q5SNT2 666 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 ABLIM2Q6H8Q1 611 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 PGM2L1Q6PCE3 622 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 STK32CQ86UX6 486 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 OFCC1Q8IZS5 231 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 SCAIQ8N9R8 606 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 VANGL1Q8TAA9 524 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-234ENST00000557703 INTS12Q96CB8 462 aaKnown RBP12.23□□□□□ -0.45
SHMT2-234ENST00000557703 SLC41A3Q96GZ6 507 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 ZNF347Q96SE7 839 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 THTPAQ9BU02 230 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 SRXN1Q9BYN0 137 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 OR11A1Q9GZK7 315 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 MAGIXQ9H6Y5 334 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 PLSCR4Q9NRQ2 329 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 PARPBPQ9NWS1 579 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 JKAMPQ9P055 326 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms