RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 NME5P56597 212 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 VSNL1P62760 191 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 H3F3AP84243 136 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 BNIP2Q12982 314 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 SLC17A1Q14916 467 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 SYPL1Q16563 259 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 OTUD3Q5T2D3 398 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-210ENST00000557431 ATAD3BQ5T9A4 648 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 SAXO2Q658L1 398 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 LINGO2Q7L985 606 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 SLC46A3Q7Z3Q1 461 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 SPATA19Q7Z5L4 167 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 MYPOPQ86VE0 399 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-210ENST00000557431 MIPOL1Q8TD10 442 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 AURKBQ96GD4 344 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-210ENST00000557431 ALKBH3Q96Q83 286 aaPredicted RBP12.28□□□□□ -0.44
SLIRP-210ENST00000557431 BPESC1Q9GZL8 116 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 SAP130Q9H0E3 1048 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 AKTIPQ9H8T0 292 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 PPCSQ9HAB8 311 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 DCTN4Q9UJW0 460 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 SLC9A8Q9Y2E8 581 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 NBEAL1Q6ZS30 2694 aa12.28□□□□□ -0.44
SLIRP-210ENST00000557431 HMGN4O00479 90 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 TGFAP01135 160 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 CHRM4P08173 479 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 CSF3P09919 207 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 GKN3PP0CG01 181 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 UQCRC2P22695 453 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 MPGP29372 298 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 CHI3L1P36222 383 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-210ENST00000557431 KHKP50053 298 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 PRPS1P60891 318 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 SLC35A1P78382 337 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 EMX2Q04743 252 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 CEACAM7Q14002 265 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 OR7A5Q15622 319 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 CR1LQ2VPA4 569 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 SPANXN4Q5MJ08 99 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 WDR93Q6P2C0 686 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 AAED1Q7RTV5 226 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 GPAT4Q86UL3 456 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 RNF130Q86XS8 419 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 ZCCHC24Q8N2G6 241 aaKnown RBP12.27□□□□□ -0.45
SLIRP-210ENST00000557431 ZNF781Q8N8C0 355 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 ZIC4Q8N9L1 334 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 PNPT1Q8TCS8 783 aaKnown RBP12.27□□□□□ -0.45
SLIRP-210ENST00000557431 ZBTB9Q96C00 473 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 DDIT4LQ96D03 193 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 SLC35A5Q9BS91 424 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 DPY30Q9C005 99 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 SLC38A1Q9H2H9 487 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-210ENST00000557431 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.45
SLIRP-210ENST00000557431 MARCOQ9UEW3 520 aaPredicted RBP12.27□□□□□ -0.45
SLIRP-210ENST00000557431 PCDHGB4Q9UN71 923 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 FKBP7Q9Y680 259 aa12.27□□□□□ -0.45
SLIRP-210ENST00000557431 A0A096LPE4 126 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 A0A1W2PPZ6 126 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 BPGMP07738 259 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 CELA3BP08861 270 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 CALCRP30988 508 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 SELENOPP49908 381 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 POLR2HP52434 150 aaKnown RBP12.26□□□□□ -0.45
SLIRP-210ENST00000557431 HPCAP84074 193 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 TBRG1Q3YBR2 411 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 MRPL2Q5T653 305 aaKnown RBP12.26□□□□□ -0.45
SLIRP-210ENST00000557431 KLHL24Q6TFL4 600 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 C17orf78Q8N4C9 275 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 C1orf162Q8NEQ5 155 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-210ENST00000557431 OR9K2Q8NGE7 335 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 WDR60Q8WVS4 1066 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 NAA11Q9BSU3 229 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-210ENST00000557431 C20orf27Q9GZN8 174 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 EXOSC3Q9NQT5 275 aaKnown RBP12.26□□□□□ -0.45
SLIRP-210ENST00000557431 RLIMQ9NVW2 624 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 ARHGAP32A7KAX9 2087 aa12.26□□□□□ -0.45
SLIRP-210ENST00000557431 WNK2Q9Y3S1 2297 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 DNPH1O43598 174 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 GSNP06396 782 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 BMP4P12644 408 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 CDKN2CP42773 168 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 SNRPD2P62316 118 aaKnown RBP12.25□□□□□ -0.45
SLIRP-210ENST00000557431 EPS8Q12929 822 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 MAD2L1Q13257 205 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-210ENST00000557431 CASP8Q14790 479 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 ADIPOQQ15848 244 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 COX20Q5RI15 118 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 PAQR6Q6TCH4 344 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 VRK2Q86Y07 508 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 OR8J2Q8NGG1 315 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 OR1K1Q8NGR3 316 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 AENQ8WTP8 325 aaKnown RBP12.25□□□□□ -0.45
SLIRP-210ENST00000557431 NEURL3Q96EH8 262 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 TEX37Q96LM6 180 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 SLC38A2Q96QD8 506 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 NELFAQ9H3P2 528 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 POLE3Q9NRF9 147 aa12.25□□□□□ -0.45
SLIRP-210ENST00000557431 CA10Q9NS85 328 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms