RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 OR52N2Q8NGI0 321 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 HLA-CQ95604 372 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CTDSP1Q9GZU7 261 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 LHPPQ9H008 270 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 A3GALT2U3KPV4 340 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 H3BQ06 376 aaPredicted RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 AQP9O43315 295 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SLC43A1O75387 559 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SPATA31C1P0DKV0 1188 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SSBP1Q04837 148 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CHADLQ6NUI6 762 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 HAS1Q92839 578 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF689Q96CS4 500 aaPredicted RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 ABHD6Q9BV23 337 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 INTS6Q9UL03 887 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 POLHQ9Y253 713 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 FCF1Q9Y324 198 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 MAT2AP31153 395 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CORO6Q6QEF8 472 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF485Q8NCK3 441 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 IL1F10Q8WWZ1 152 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 LPAR4Q99677 370 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 ATG101Q9BSB4 218 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 UCK1Q9HA47 277 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 TCAPO15273 167 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 FKBP2P26885 142 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 OPRL1P41146 370 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 OR4D2P58180 307 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 VASNQ6EMK4 673 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 OR51A2Q8NGJ7 313 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 WDR61Q9GZS3 305 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SLC22A20A6NK97 555 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 PLSCR1O15162 318 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 ICAM2P13598 275 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 KCNE1P15382 129 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 MAOBP27338 520 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 PLBD1Q6P4A8 553 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CDRT4Q8N9R6 151 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SLC6A18Q96N87 628 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 EBF1Q9UH73 591 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 RNASET2O00584 256 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CCL16O15467 120 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 KLRC4O43908 158 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 GSRP00390 522 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 HLA-FP30511 346 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 ELAVL3Q14576 367 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SHEQ5VZ18 495 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SPATA31A5Q5VU36 1347 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SPATA31A7Q8IWB4 1347 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 TMEM235A6NFC5 223 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 ST8SIA5O15466 376 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 FGF7P21781 194 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CEBPEQ15744 281 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 KDM4DQ6B0I6 523 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CATSPERGQ6ZRH7 1159 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 MBOAT4Q96T53 435 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 CABLES2Q9BTV7 478 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 TPPP3Q9BW30 176 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 PRKACGP22612 351 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 KCTD11Q693B1 232 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 FRMD1Q8N878 549 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 MUCL1Q96DR8 90 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 LMF1Q96S06 567 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 TIMM29Q9BSF4 260 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 METTL17Q9H7H0 456 aaPredicted RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 GJA5P36382 358 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 KIR2DL3P43628 341 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 PDZK1IP1Q13113 114 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 FEVQ99581 238 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 C4BPAP04003 597 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 ACRV1P26436 265 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 NRMQ8IXM6 262 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 RNF113BQ8IZP6 322 aaKnown RBP8.29□□□□□ -1.08
SYNE3-205ENST00000557275 IRF7Q92985 503 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 SLC35E1Q96K37 410 aa8.29□□□□□ -1.08
SYNE3-205ENST00000557275 LGALS8O00214 317 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 M6PRP20645 277 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 PBX1P40424 430 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 BTG1P62324 171 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 TRA2BP62995 288 aaKnown RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 NSDHLQ15738 373 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF322Q6U7Q0 402 aaPredicted RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 OR1J1Q8NGS3 322 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 OR13D1Q8NGV5 346 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 TMEM88BA6NKF7 163 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 POP7O75817 140 aaKnown RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 BMP1P13497 986 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 GPR4P46093 362 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 HBA1P69905 142 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 C1orf74Q96LT6 269 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 JAM3Q9BX67 310 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 LTN1O94822 1766 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 SMIM30A4D0T7 59 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 SLC38A8A6NNN8 435 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 NUDT21O43809 227 aaKnown RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 HTR2CP28335 458 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 DUSP1P28562 367 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 EBPQ15125 230 aaKnown RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 SLAIN1Q8ND83 568 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms