RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 IMPDH2P12268 514 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 FCGR2AP12318 317 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 CCNA2P20248 432 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 SLC7A1P30825 629 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 KDELR2P33947 212 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 CPA2P48052 419 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 DIO1P49895 249 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 COPZ1P61923 177 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 VWA1Q6PCB0 445 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 FAM214BQ7L5A3 538 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 P4HA3Q7Z4N8 544 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 TSPYL5Q86VY4 417 aaPredicted RBP8.61□□□□□ -1.03
SRP54-210ENST00000556380 RBM45Q8IUH3 476 aaKnown RBP8.61□□□□□ -1.03
SRP54-210ENST00000556380 MICU2Q8IYU8 434 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 CADM2Q8N3J6 435 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 OR2T12Q8NG77 320 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 OR6T1Q8NGN1 323 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 CPNE4Q96A23 557 aaPredicted RBP8.61□□□□□ -1.03
SRP54-210ENST00000556380 GMPPAQ96IJ6 420 aaPredicted RBP8.61□□□□□ -1.03
SRP54-210ENST00000556380 ZNF559Q9BR84 538 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 POTEKPQ9BYX7 375 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 TRIM2Q9C040 744 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 C12orf10Q9HB07 376 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 GLRX2Q9NS18 164 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 TAGLN3Q9UI15 199 aa8.61□□□□□ -1.03
SRP54-210ENST00000556380 MCTS1Q9ULC4 181 aaKnown RBP8.61□□□□□ -1.03
SRP54-210ENST00000556380 SPIN1Q9Y657 262 aaPredicted RBP8.61□□□□□ -1.03
SRP54-210ENST00000556380 ABCA4P78363 2273 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 IGHV3-15A0A0B4J1V0 119 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 CYSRT1A8MQ03 144 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 ZNF814B7Z6K7 855 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 M0R3H8 397 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 DNPH1O43598 174 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 CYTIPO60759 359 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 FZD7O75084 574 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 SYNGR4O95473 234 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 THY1P04216 161 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 FESP07332 822 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 T-ENOLP0DO92 83 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 TFPIP10646 304 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 CD8BP10966 210 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
SRP54-210ENST00000556380 CXCR1P25024 350 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 CPOXP36551 454 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 PCYT1AP49585 367 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 ASCL1P50553 236 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 RGS8P57771 180 aaPredicted RBP8.6□□□□□ -1.03
SRP54-210ENST00000556380 EGR4Q05215 589 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 TNP2Q05952 138 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 BNIP2Q12982 314 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 FXNQ16595 210 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 ZNF474Q6S9Z5 364 aaPredicted RBP8.6□□□□□ -1.03
SRP54-210ENST00000556380 LINC00114Q6XXX2 140 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 FCRLAQ7L513 359 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 DMRTC2Q8IXT2 367 aaPredicted RBP8.6□□□□□ -1.03
SRP54-210ENST00000556380 SLC43A2Q8N370 569 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 CCDC197Q8NCU1 140 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 OR52E4Q8NGH9 312 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 ABHD3Q8WU67 409 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 RNASE6Q93091 150 aaKnown RBP8.6□□□□□ -1.03
SRP54-210ENST00000556380 SLC38A4Q969I6 547 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 PRRG4Q9BZD6 226 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 PCDHAC1Q9H158 963 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 PIGMQ9H3S5 423 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 GP6Q9HCN6 339 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 PLSCR4Q9NRQ2 329 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 KLHL28Q9NXS3 571 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 TESQ9UGI8 421 aaKnown RBP8.6□□□□□ -1.03
SRP54-210ENST00000556380 CD300AQ9UGN4 299 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 CLEC4AQ9UMR7 237 aa8.6□□□□□ -1.03
SRP54-210ENST00000556380 IGKV1D-42A0A075B6H8 117 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 IGKV3D-15A0A087WSY6 115 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 A0A0B4J2E0 115 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 A0A1B0GX12 115 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 LIPT2A6NK58 231 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 ZNF716A6NP11 495 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 A8MVM7 634 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 SULT2B1O00204 365 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 NDUFAB1O14561 156 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 RAMP1O60894 148 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 PRKD3O94806 890 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 EPXP11678 715 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 P2RY4P51582 365 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 CSNK2A1P68400 391 aaPredicted RBP8.59□□□□□ -1.03
SRP54-210ENST00000556380 SLC25A3Q00325 362 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 PDK3Q15120 406 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 RNPS1Q15287 305 aaKnown RBP8.59□□□□□ -1.03
SRP54-210ENST00000556380 OR1Q1Q15612 314 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 CYBRD1Q53TN4 286 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 GTF2IRD2BQ6EKJ0 949 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 ABLIM2Q6H8Q1 611 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 ULK3Q6PHR2 472 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 GTF2IRD2Q86UP8 949 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 TUSC5Q8IXB3 177 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 CNEP1R1Q8N9A8 125 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 OR6K3Q8NGY3 331 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 STK35Q8TDR2 534 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 DNAJA4Q8WW22 397 aaPredicted RBP8.59□□□□□ -1.03
SRP54-210ENST00000556380 RASSF5Q8WWW0 418 aa8.59□□□□□ -1.03
SRP54-210ENST00000556380 DDIT4LQ96D03 193 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms