RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 UBQLN3Q9H347 655 aa9.22□□□□□ -0.93
SRP54-208ENST00000555557 Q9H521 79 aa9.22□□□□□ -0.93
SRP54-208ENST00000555557 BOKQ9UMX3 212 aaPredicted RBP9.22□□□□□ -0.93
SRP54-208ENST00000555557 KLF13Q9Y2Y9 288 aaPredicted RBP9.22□□□□□ -0.93
SRP54-208ENST00000555557 GMPPBQ9Y5P6 360 aa9.22□□□□□ -0.93
SRP54-208ENST00000555557 SPENQ96T58 3664 aaKnown RBP9.22□□□□□ -0.93
SRP54-208ENST00000555557 USP24Q9UPU5 2620 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 H0YAE9 185 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 KLRC4-KLRK1H3BQV0 150 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 M0R129 80 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 SLC16A6O15403 523 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 NPIPB7O75200 414 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 CELA3AP09093 270 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 TFPIP10646 304 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 SHC1P29353 583 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 ESRRGP62508 458 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 C19orf57Q0VDD7 668 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 FHL1Q13642 323 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 ZNF74Q16587 644 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 WIPI1Q5MNZ9 446 aaPredicted RBP9.21□□□□□ -0.93
SRP54-208ENST00000555557 C1orf140Q5VVS0 124 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 BORAQ6PGQ7 559 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 UNQ6494/PRO21346Q6UXR6 183 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 ZNF620Q6ZNG0 422 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 RASSF6Q6ZTQ3 369 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 USP51Q70EK9 711 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 OAFQ86UD1 273 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 FAM83FQ8NEG4 500 aaPredicted RBP9.21□□□□□ -0.93
SRP54-208ENST00000555557 OR14L1PQ8NHC6 308 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 EXTL1Q92935 676 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 ZBTB8AQ96BR9 441 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 SLC25A36Q96CQ1 311 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 SAMD8Q96LT4 415 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 HHATLQ9HCP6 504 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 SEC14L4Q9UDX3 406 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 NDRG4Q9ULP0 352 aaKnown RBP9.21□□□□□ -0.93
SRP54-208ENST00000555557 SIGLEC7Q9Y286 467 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 TMEM5Q9Y2B1 443 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 LRCH1Q9Y2L9 728 aa9.21□□□□□ -0.93
SRP54-208ENST00000555557 TRAV36DV7A0A075B6V5 113 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 A0A087WZY1 265 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 OR2M5A3KFT3 312 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 DPPA5A6NC42 116 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 ZAR1LA6NP61 321 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 E9PQ18 207 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 CDK2AP1O14519 115 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 PTP4A3O75365 173 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 OR7A10O76100 309 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 SRD5A2P31213 254 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 SFTPDP35247 375 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 EIF1P41567 113 aaKnown RBP9.21□□□□□ -0.94
SRP54-208ENST00000555557 MAGEA5P43359 124 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 TPD52P55327 224 aaPredicted RBP9.21□□□□□ -0.94
SRP54-208ENST00000555557 TMPRSS3P57727 454 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 CXADRP78310 365 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 PMP22Q01453 160 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 PLGLB1Q02325 96 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 GINS1Q14691 196 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 PDK3Q15120 406 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 TBR1Q16650 682 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 ACSM5Q6NUN0 579 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 GTPBP8Q8N3Z3 284 aaPredicted RBP9.21□□□□□ -0.94
SRP54-208ENST00000555557 SMPDL3BQ92485 455 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 HRASLS5Q96KN8 279 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 TSSK6Q9BXA6 273 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 OR52D1Q9H346 318 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 ZNF703Q9H7S9 590 aaPredicted RBP9.21□□□□□ -0.94
SRP54-208ENST00000555557 NANSQ9NR45 359 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 SERINC1Q9NRX5 453 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 IL20Q9NYY1 176 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 ZNF337Q9Y3M9 751 aa9.21□□□□□ -0.94
SRP54-208ENST00000555557 BOD1L1Q8NFC6 3051 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 A0A1W2PNR3 127 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 BLOC1S5-TXNDC5H3BN57 136 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 BGLAPP02818 100 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 MYF6P23409 242 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 ADH6P28332 368 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 GIPRP48546 466 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 B3GALT5-AS1P59052 145 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 KEAP1Q14145 624 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 TMEM44Q2T9K0 475 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 TMEM176BQ3YBM2 270 aaPredicted RBP9.2□□□□□ -0.94
SRP54-208ENST00000555557 ZBED5Q49AG3 693 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 SYT14P1Q58G82 188 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 RNFT1Q5M7Z0 435 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 ZNF691Q5VV52 312 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 SLC6A19Q695T7 634 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 IGFN1Q86VF2 1251 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 ZADH2Q8N4Q0 377 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 MARVELD2Q8N4S9 558 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 TMEM251Q8N6I4 163 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 TMEM178AQ8NBL3 297 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 FAM81AQ8TBF8 368 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 TEX47Q8TBZ9 253 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 FANK1Q8TC84 345 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 STK35Q8TDR2 534 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 DDIT4LQ96D03 193 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 ABHD17AQ96GS6 310 aa9.2□□□□□ -0.94
SRP54-208ENST00000555557 MFRPQ9BY79 579 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms