RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ZNF570Q96NI8 536 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 VCX3BQ9H321 246 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 CTPS2Q9NRF8 586 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 VAPAQ9P0L0 249 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 C6orf203Q9P0P8 240 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-211ENST00000554310 SLAMF8Q9P0V8 285 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 KLHL9Q9P2J3 617 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-211ENST00000554310 IFT52Q9Y366 437 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 HDGFL3Q9Y3E1 203 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 F8P00451 2351 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 PRORSD1PA6NEY8 169 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 SULT2B1O00204 365 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 SMAD9O15198 467 aaKnown RBP11.64□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF208O43345 1280 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 C8BP07358 591 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 TFPIP10646 304 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 HSD17B1P14061 328 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 ENPP1P22413 925 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 SLC1A3P43003 542 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 SLC7A2P52569 658 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 ABLIM2Q6H8Q1 611 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 TMPPEQ6ZT21 453 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF550Q7Z398 422 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 ARPINQ7Z6K5 226 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 DPP10Q8N608 796 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 RNF148Q8N7C7 305 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 HIPK4Q8NE63 616 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 MAL2Q969L2 176 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 SLC35B4Q969S0 331 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 ZHX1-C8orf76Q96EF9 292 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 MED18Q9BUE0 208 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 SPATA9Q9BWV2 254 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 MUC13Q9H3R2 512 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 BCO1Q9HAY6 547 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF226Q9NYT6 803 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF232Q9UNY5 417 aa11.64□□□□□ -0.55
SHMT2-211ENST00000554310 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
SHMT2-211ENST00000554310 TMED7-TICAM2A0A0A6YYA0 188 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 EVPLLA8MZ36 301 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 NME4O00746 187 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 CASKO14936 926 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 CYTIPO60759 359 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 STAMBPO95630 424 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 PMS2P2O95744 297 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 FESP07332 822 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 YES1P07947 543 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 ARAFP10398 606 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 ETS2P15036 469 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 PPP3CBP16298 524 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 GPX2P18283 190 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 TACR3P29371 465 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 ERFP50548 548 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 COPZ1P61923 177 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 BNIP2Q12982 314 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 NFYCQ13952 458 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 EXOC3L2Q2M3D2 409 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF311Q5JNZ3 666 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 TFAP2EQ6VUC0 442 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 CDC20BQ86Y33 519 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 ADGRG3Q86Y34 549 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 KRT73Q86Y46 540 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 TUSC5Q8IXB3 177 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 SLC15A3Q8IY34 581 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 PQLC1Q8N2U9 271 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 NINJ1Q92982 152 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 DDIT4LQ96D03 193 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF184Q99676 751 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-211ENST00000554310 PSD2Q9BQI7 771 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 CPPED1Q9BRF8 314 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-211ENST00000554310 TMEM38AQ9H6F2 299 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 C12orf49Q9H741 205 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 RLIMQ9NVW2 624 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 KLHL28Q9NXS3 571 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 OSGIN1Q9UJX0 560 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 EDARQ9UNE0 448 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 LRCH1Q9Y2L9 728 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 TMED7Q9Y3B3 224 aa11.63□□□□□ -0.55
SHMT2-211ENST00000554310 FREM1Q5H8C1 2179 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 IGHV3-15A0A0B4J1V0 119 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 TCRBV3S1A0A5B6 114 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF724A8MTY0 619 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 PGM3O95394 542 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 HRGP04196 525 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 RPSAP08865 295 aaKnown RBP11.62□□□□□ -0.55
SHMT2-211ENST00000554310 SLC6A2P23975 617 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 PRKAR1BP31321 381 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 DNAJA1P31689 397 aaKnown RBP11.62□□□□□ -0.55
SHMT2-211ENST00000554310 CDK6Q00534 326 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 RASGEF1BQ0VAM2 473 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 WBP2NLQ6ICG8 309 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 REEP3Q6NUK4 255 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 DLEU7Q6UYE1 221 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 FAM156AQ8NDB6 213 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 NFKBIDQ8NI38 313 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 PIGXQ8TBF5 258 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 ARL5BQ96KC2 179 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 WFIKKN1Q96NZ8 548 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 ECSITQ9BQ95 431 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms