RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 GTF2IRD2Q86UP8 949 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 GGNQ86UU5 652 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 ZNF786Q8N393 782 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 ZNF611Q8N823 705 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 DRAXINQ8NBI3 349 aaPredicted RBP7.89□□□□□ -1.15
TDP1-208ENST00000553989 MAPK1IP1LQ8NDC0 245 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 OR2V1Q8NHB1 315 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 ELP4Q96EB1 424 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 TRMT61AQ96FX7 289 aaKnown RBP7.89□□□□□ -1.15
TDP1-208ENST00000553989 SH3YL1Q96HL8 342 aaPredicted RBP7.89□□□□□ -1.15
TDP1-208ENST00000553989 RNF145Q96MT1 663 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 CCDC115Q96NT0 180 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 AMDHD1Q96NU7 426 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 CGREF1Q99674 301 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 HHATLQ9HCP6 504 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 MYNNQ9NPC7 610 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 PLSCR4Q9NRQ2 329 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 GLRX2Q9NS18 164 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 DNAJB9Q9UBS3 223 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 GPR52Q9Y2T5 361 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 RNF115Q9Y4L5 304 aa7.89□□□□□ -1.15
TDP1-208ENST00000553989 A0A087WZY1 265 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 IGLV3-32A0A0A0MS00 114 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 A0A1W2PRB8 838 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 SCDO00767 359 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 TMCC2O75069 709 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 CRLF1O75462 422 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 OXSR1O95747 527 aaPredicted RBP7.88□□□□□ -1.15
TDP1-208ENST00000553989 NUDT14O95848 222 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 CD3EP07766 207 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 PRPS2P11908 318 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ETS2P15036 469 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 AGTR1P30556 359 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 SFTPDP35247 375 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 TMBIM6P55061 237 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 RAC1P63000 192 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 IL18R1Q13478 541 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 DAG1Q14118 895 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 PRSS53Q2L4Q9 553 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 PAGE3Q5JUK9 113 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 TMEM201Q5SNT2 666 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 FAM71E1Q6IPT2 247 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ANKRD26P1Q6NSI1 321 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 FIGNL1Q6PIW4 674 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 LINC00299Q6ZSB3 139 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 MSANTD1Q6ZTZ1 278 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ESPNLQ6ZVH7 1005 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 IKBIPQ70UQ0 350 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ZNF551Q7Z340 670 aaPredicted RBP7.88□□□□□ -1.15
TDP1-208ENST00000553989 ZDHHC13Q8IUH4 622 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ZNF619Q8N2I2 560 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 GTPBP8Q8N3Z3 284 aaPredicted RBP7.88□□□□□ -1.15
TDP1-208ENST00000553989 CDRT4Q8N9R6 151 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ZNF555Q8NEP9 628 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 STEAP2Q8NFT2 490 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 MIPOL1Q8TD10 442 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 CYGBQ8WWM9 190 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 FBXW5Q969U6 566 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ZBTB8AQ96BR9 441 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 S100PBPQ96BU1 408 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 DOK1Q99704 481 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 DPY30Q9C005 99 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 MAGIXQ9H6Y5 334 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 RMND5AQ9H871 391 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ZFAND3Q9H8U3 227 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 NGBQ9NPG2 151 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 ZNF701Q9NV72 531 aaPredicted RBP7.88□□□□□ -1.15
TDP1-208ENST00000553989 MED17Q9NVC6 651 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 USE1Q9NZ43 259 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 BLOC1S6Q9UL45 172 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 OAZ3Q9UMX2 235 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 SNX8Q9Y5X2 465 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 DNHD1Q96M86 4753 aa7.88□□□□□ -1.15
TDP1-208ENST00000553989 CSPG4Q6UVK1 2322 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 RNF212BA8MTL3 300 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 ALG1L2C9J202 215 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 DLGAP1O14490 977 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 MRPS14O60783 128 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 SEC22BO75396 215 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 RSL1D1O76021 490 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 IGKV1D-16P01601 117 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 PAX1P15863 534 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 GGT1P19440 569 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 PSMB1P20618 241 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 DCKP27707 260 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 IDUAP35475 653 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 CDKN1AP38936 164 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 MANFP55145 182 aaKnown RBP7.87□□□□□ -1.15
TDP1-208ENST00000553989 CARD18P57730 90 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 HPCAP84074 193 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 FAPQ12884 760 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 TSC22D1Q15714 1073 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 ETFDHQ16134 617 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.87□□□□□ -1.15
TDP1-208ENST00000553989 TMEM44Q2T9K0 475 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 PLPPR5Q32ZL2 321 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 CYBRD1Q53TN4 286 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 RUNDC3AQ59EK9 446 aa7.87□□□□□ -1.15
TDP1-208ENST00000553989 CPTPQ5TA50 214 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms