RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CCDC172P0C7W6 258 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF43P17038 809 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 HOXD10P28358 340 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 RAB10P61026 200 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 RAB11AP62491 216 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 PAX5Q02548 391 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 OR5I1Q13606 314 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 LY6DQ14210 128 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 GRB7Q14451 532 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 LTB4RQ15722 352 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 RAB11BQ15907 218 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 MRPL23Q16540 153 aaKnown RBP4.64□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF506Q5JVG8 444 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 C9orf135Q5VTT2 229 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 SASS6Q6UVJ0 657 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 NIPA1Q7RTP0 329 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 SLC22A18ASQ8N1D0 253 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 SVOPLQ8N434 492 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 Q8N9P0 234 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-208ENST00000553278 OR4K14Q8NGD5 310 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 OR4A4PQ8NGN8 299 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 KIFAP3Q92845 792 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 KIAA1143Q96AT1 154 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-208ENST00000553278 ART5Q96L15 291 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 DUX3Q96PT4 197 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 CCDC28BQ9BUN5 200 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 TUBB1Q9H4B7 451 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 CCNB1IP1Q9NPC3 277 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 THUMPD1Q9NXG2 353 aaKnown RBP4.64□□□□□ -1.67
SCFD1-208ENST00000553278 AHSPQ9NZD4 102 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 RIMS3Q9UJD0 308 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 RPL36Q9Y3U8 105 aaKnown RBP4.64□□□□□ -1.67
SCFD1-208ENST00000553278 USP47Q96K76 1375 aa4.64□□□□□ -1.67
SCFD1-208ENST00000553278 LINC00854A0A1B0GVQ3 168 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 OR5B21A6NL26 309 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 EFCAB7A8K855 629 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF701M0R085 212 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-208ENST00000553278 NDUFS8O00217 210 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 WWP2O00308 870 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 UGT1A9O60656 530 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 GPX5O75715 221 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 LALBAP00709 142 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 CSTAP01040 98 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 CRYGCP07315 174 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 ABOP16442 354 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 STOMP27105 288 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 CALCRP30988 508 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 HSD17B2P37059 387 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 VHLP40337 213 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 RPL29P47914 159 aaKnown RBP4.63□□□□□ -1.67
SCFD1-208ENST00000553278 BCAP31P51572 246 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 DAOAP59103 153 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 RPS14P62263 151 aaKnown RBP4.63□□□□□ -1.67
SCFD1-208ENST00000553278 CHRNB3Q05901 458 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 SLC10A7Q0GE19 358 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 STK11Q15831 433 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 DGUOKQ16854 277 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 TMEM30BQ3MIR4 351 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 OR52E8Q6IFG1 317 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 LINC00523Q86TU6 105 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 MMAAQ8IVH4 418 aaKnown RBP4.63□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF248Q8NDW4 579 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 PLPPR1Q8TBJ4 325 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 MARCH1Q8TCQ1 289 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 ZPLD1Q8TCW7 415 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 SETD7Q8WTS6 366 aaKnown RBP4.63□□□□□ -1.67
SCFD1-208ENST00000553278 PSMG2Q969U7 264 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 C19orf60Q96EN9 201 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 KCNA7Q96RP8 456 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 MCHR1Q99705 422 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 KIF27Q86VH2 1401 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 SNED1Q8TER0 1413 aa4.63□□□□□ -1.67
SCFD1-208ENST00000553278 A0A1B0GWB2 263 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 TEX46H3BTG2 121 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 AIM2O14862 343 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 EIF3HO15372 352 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCFD1-208ENST00000553278 LATO43561 262 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 OR7A10O76100 309 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 NOL4O94818 638 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 ZNF432O94892 652 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 SLC2A10O95528 541 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 PAHP00439 452 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 IVLP07476 585 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 UBTFL6P0CB48 400 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-208ENST00000553278 GATA1P15976 413 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-208ENST00000553278 SRMP19623 302 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 ADORA2BP29275 332 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 HMGCLP35914 325 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 DDOSTP39656 456 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 KPNA2P52292 529 aaKnown RBP4.62□□□□□ -1.67
SCFD1-208ENST00000553278 YWHAGP61981 247 aaKnown RBP eCLIP4.62□□□□□ -1.67
SCFD1-208ENST00000553278 LIPEQ05469 1076 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 ILKQ13418 452 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 CARD16Q5EG05 197 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 C22orf42Q6IC83 251 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 SLC16A14Q7RTX9 510 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 VRK2Q86Y07 508 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 C9orf40Q8IXQ3 194 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 KLHDC8BQ8IXV7 354 aa4.62□□□□□ -1.67
SCFD1-208ENST00000553278 SPERTQ8NA61 448 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms