RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 NAA11Q9BSU3 229 aaPredicted RBP14.03□□□□□ -0.16
CDK4-215ENST00000553237 CACYBPQ9HB71 228 aaKnown RBP14.03□□□□□ -0.16
CDK4-215ENST00000553237 FGFR1OP2Q9NVK5 253 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 SLAMF8Q9P0V8 285 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 TRIM33Q9UPN9 1127 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 LAMP3Q9UQV4 416 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 CHST2Q9Y4C5 530 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 RAI1Q7Z5J4 1906 aaPredicted RBP14.03□□□□□ -0.16
CDK4-215ENST00000553237 USF3Q68DE3 2245 aa14.03□□□□□ -0.16
CDK4-215ENST00000553237 A0A096LPI6 279 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 A0A0G2JPF8 293 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 CIB4A0PJX0 185 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 HNRNPCL2B2RXH8 293 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 HNRNPCL3B7ZW38 293 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 H7C1Q1 480 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 FRS3O43559 492 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 EIF1BO60739 113 aaKnown RBP14.02□□□□□ -0.17
CDK4-215ENST00000553237 HNRNPCL1O60812 293 aaKnown RBP14.02□□□□□ -0.17
CDK4-215ENST00000553237 RAD51DO75771 328 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 CNOT4O95628 575 aaKnown RBP14.02□□□□□ -0.17
CDK4-215ENST00000553237 HNRNPCL4P0DMR1 293 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 TROVE2P10155 538 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDK4-215ENST00000553237 COX5AP20674 150 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 SLC16A1P53985 500 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 FOXG1P55316 489 aaPredicted RBP14.02□□□□□ -0.17
CDK4-215ENST00000553237 COPZ1P61923 177 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 IRX1P78414 480 aaPredicted RBP14.02□□□□□ -0.17
CDK4-215ENST00000553237 FAPQ12884 760 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 CEACAM7Q14002 265 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 OR7A5Q15622 319 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 ZNF311Q5JNZ3 666 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 WBP2NLQ6ICG8 309 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 CASP12Q6UXS9 341 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 SERPINA11Q86U17 422 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 BIVMQ86UB2 503 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 MUCL1Q96DR8 90 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 SPATA9Q9BWV2 254 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 GSX2Q9BZM3 304 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 RABEP2Q9H5N1 569 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 SLC52A3Q9NQ40 469 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 TMEM45AQ9NWC5 275 aa14.02□□□□□ -0.17
CDK4-215ENST00000553237 THUMPD1Q9NXG2 353 aaKnown RBP14.02□□□□□ -0.17
CDK4-215ENST00000553237 A0A1W2PR80 420 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 TRIM64A6NGJ6 449 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 TRIM64BA6NI03 449 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 OR5H1A6NKK0 313 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 SMAD7O15105 426 aaKnown RBP14.01□□□□□ -0.17
CDK4-215ENST00000553237 AKR7A3O95154 331 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 THBS1P07996 1170 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 HOXB9P17482 250 aaPredicted RBP14.01□□□□□ -0.17
CDK4-215ENST00000553237 IDUAP35475 653 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 MAP2K6P52564 334 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 HOXC5Q00444 222 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 SF3A3Q12874 501 aaKnown RBP eCLIP14.01□□□□□ -0.175e-9■□□□□ 11.1
CDK4-215ENST00000553237 PAGE3Q5JUK9 113 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 TIMM23BQ5SRD1 257 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 OTUD3Q5T2D3 398 aaPredicted RBP14.01□□□□□ -0.17
CDK4-215ENST00000553237 RNF220Q5VTB9 566 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 C9orf135Q5VTT2 229 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 ADAM5Q6NVV9 412 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 PRSS57Q6UWY2 283 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 MSRB3Q8IXL7 192 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 TMEM99Q8N816 258 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 KBTBD8Q8NFY9 601 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 OR52E4Q8NGH9 312 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 OR52N5Q8NH56 324 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 POM121Q96HA1 1249 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 TMEM120AQ9BXJ8 343 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 RAD21L1Q9H4I0 556 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 CXorf56Q9H5V9 222 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 ZNF385DQ9H6B1 395 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 A4GALTQ9NPC4 353 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 ASB6Q9NWX5 421 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 SLC25A37Q9NYZ2 338 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 NPAP1Q9NZP6 1156 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 IFT52Q9Y366 437 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 FLVCR1Q9Y5Y0 555 aa14.01□□□□□ -0.17
CDK4-215ENST00000553237 LIPT2A6NK58 231 aa14□□□□□ -0.17
CDK4-215ENST00000553237 C5orf58C9J3I9 102 aa14□□□□□ -0.17
CDK4-215ENST00000553237 PGM3O95394 542 aa14□□□□□ -0.17
CDK4-215ENST00000553237 GPIP06744 558 aa14□□□□□ -0.17
CDK4-215ENST00000553237 SOD3P08294 240 aa14□□□□□ -0.17
CDK4-215ENST00000553237 HOXB4P17483 251 aaPredicted RBP14□□□□□ -0.17
CDK4-215ENST00000553237 MDH1P40925 334 aaKnown RBP14□□□□□ -0.17
CDK4-215ENST00000553237 ATP5J2P56134 94 aa14□□□□□ -0.17
CDK4-215ENST00000553237 FADDQ13158 208 aa14□□□□□ -0.17
CDK4-215ENST00000553237 SLC17A1Q14916 467 aa14□□□□□ -0.17
CDK4-215ENST00000553237 ZSWIM7Q19AV6 140 aa14□□□□□ -0.17
CDK4-215ENST00000553237 ZNF672Q499Z4 452 aaPredicted RBP14□□□□□ -0.17
CDK4-215ENST00000553237 METTL21CQ5VZV1 264 aa14□□□□□ -0.17
CDK4-215ENST00000553237 CGB2Q6NT52 195 aa14□□□□□ -0.17
CDK4-215ENST00000553237 PAQR6Q6TCH4 344 aa14□□□□□ -0.17
CDK4-215ENST00000553237 CLEC9AQ6UXN8 241 aa14□□□□□ -0.17
CDK4-215ENST00000553237 C10orf111Q8N326 155 aa14□□□□□ -0.17
CDK4-215ENST00000553237 NFKBIDQ8NI38 313 aa14□□□□□ -0.17
CDK4-215ENST00000553237 SMAP2Q8WU79 429 aaPredicted RBP14□□□□□ -0.17
CDK4-215ENST00000553237 FBXW5Q969U6 566 aa14□□□□□ -0.17
CDK4-215ENST00000553237 BDH2Q9BUT1 245 aa14□□□□□ -0.17
CDK4-215ENST00000553237 CCDC134Q9H6E4 229 aa14□□□□□ -0.17
CDK4-215ENST00000553237 ARMC7Q9H6L4 198 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms