RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	COL6A5	A8TX70	2615 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	CFAP73	A6NFT4	308 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	PDLIM1	O00151	329 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	DNPH1	O43598	174 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	SSX4	O60224	188 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	AKR7A3	O95154	331 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	DBI	P07108	87 aa	Known RBP	10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	NUDT7	P0C024	238 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	CD40	P25942	277 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	SLC1A3	P43003	542 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	MAGEA8	P43361	318 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	SLC35A1	P78382	337 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	DMTN	Q08495	405 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	CEACAM7	Q14002	265 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	OR7A5	Q15622	319 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	C11orf71	Q6IPW1	123 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	SLC22A25	Q6T423	547 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	CMIP	Q8IY22	773 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	CLIP4	Q8N3C7	705 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	TRIML2	Q8N7C3	387 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	DDIT4L	Q96D03	193 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	HS6ST2	Q96MM7	605 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	ZBTB18	Q99592	522 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	USB1	Q9BQ65	265 aa	Known RBP	10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	POU2F3	Q9UKI9	436 aa		10.09	□□□□□ -0.79
TUBA1B-208	ENST00000552984	IGHV4-30-2	A0A087WSY4	118 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	CDHR4	A6H8M9	788 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	TRPC5OS	A6NMA1	111 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	GPR171	O14626	319 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ZNF208	O43345	1280 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	FRS3	O43559	492 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	GPRIN2	O60269	458 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	CDH2	P19022	906 aa	Predicted RBP	10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	IDUA	P35475	653 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ACAA2	P42765	397 aa	Known RBP	10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	CRAT	P43155	626 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	CLK1	P49759	484 aa	Known RBP	10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	DSTN	P60981	165 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	MAGOH	P61326	146 aa	Known RBP	10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	HOXC5	Q00444	222 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	SLC17A1	Q14916	467 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	PDCD4	Q53EL6	469 aa	Known RBP	10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	TMEM108	Q6UXF1	575 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	SERPINA11	Q86U17	422 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	P2RY8	Q86VZ1	359 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	PEX5L	Q8IYB4	626 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	KIRREL3	Q8IZU9	778 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ZIC4	Q8N9L1	334 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	OR52P1P	Q8NH57	321 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	SLC38A5	Q8WUX1	472 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	TMEM19	Q96HH6	336 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	MAEL	Q96JY0	434 aa	Known RBP	10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ADAM19	Q9H013	955 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	MTHFD2L	Q9H903	347 aa	Predicted RBP	10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	TPT1P8	Q9HAU6	139 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	THAP1	Q9NVV9	213 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ADPRHL2	Q9NX46	363 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	P2RX2	Q9UBL9	471 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	TRAPPC4	Q9Y296	219 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	SLC9A8	Q9Y2E8	581 aa		10.08	□□□□□ -0.8
TUBA1B-208	ENST00000552984	LIPT2	A6NK58	231 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ATP6V1G2-DDX39B	F2Z307	99 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	FAAH	O00519	579 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ZNF500	O60304	480 aa	Predicted RBP	10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	CRLF1	O75462	422 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	SLC22A3	O75751	556 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	LY6H	O94772	140 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ANP32D	O95626	131 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	KRT75	O95678	551 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	TFPT	P0C1Z6	253 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	TTK	P33981	857 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	HTR3A	P46098	478 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ANXA11	P50995	505 aa	Known RBP	10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	P2RY4	P51582	365 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ETFDH	Q16134	617 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	HIKESHI	Q53FT3	197 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	C6orf10	Q5SRN2	563 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	AGAP6	Q5VW22	663 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	SLC2A7	Q6PXP3	512 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	PAQR6	Q6TCH4	344 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	GPAT4	Q86UL3	456 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	OR9K2	Q8NGE7	335 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	MAL2	Q969L2	176 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	MUS81	Q96NY9	551 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	ALKBH3	Q96Q83	286 aa	Predicted RBP	10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	DHRS9	Q9BPW9	319 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	RSPO3	Q9BXY4	272 aa	Predicted RBP	10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	AMBRA1	Q9C0C7	1298 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	SLC17A5	Q9NRA2	495 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	FAIM	Q9NVQ4	179 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	UPB1	Q9UBR1	384 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	SEC14L4	Q9UDX3	406 aa		10.07	□□□□□ -0.8
TUBA1B-208	ENST00000552984	MXRA5	Q9NR99	2828 aa		10.06	□□□□□ -0.8
TUBA1B-208	ENST00000552984		A0A096LNT2	108 aa		10.06	□□□□□ -0.8
TUBA1B-208	ENST00000552984	AQP7P3	A6NL99	342 aa		10.06	□□□□□ -0.8
TUBA1B-208	ENST00000552984	KLF11	O14901	512 aa		10.06	□□□□□ -0.8
TUBA1B-208	ENST00000552984	EIF1B	O60739	113 aa	Known RBP	10.06	□□□□□ -0.8
TUBA1B-208	ENST00000552984	IL6	P05231	212 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms