RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 BTNL2Q9UIR0 455 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 OSGIN1Q9UJX0 560 aa20.24■□□□□ 0.83
SMARCD1-209ENST00000550477 CFAP73A6NFT4 308 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 E9PBE3 544 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 FAAHO00519 579 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 BIRC5O15392 142 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 TYROBPO43914 113 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 F12P00748 615 aaPredicted RBP20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 GPIP06744 558 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 USF1P22415 310 aaPredicted RBP20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 CXCR1P25024 350 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 TACR3P29371 465 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 ETV4P43268 484 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 SPANXN4Q5MJ08 99 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 LRRC74BQ6ZQY2 392 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 AAED1Q7RTV5 226 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 PHC2Q8IXK0 858 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 WDR31Q8NA23 367 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 WDR60Q8WVS4 1066 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 CNOT9Q92600 299 aaKnown RBP20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 PANX1Q96RD7 426 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 SF3B5Q9BWJ5 86 aaKnown RBP20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 MANSC1Q9H8J5 431 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 OBP2BQ9NPH6 170 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 SLC7A10Q9NS82 523 aa20.23■□□□□ 0.83
SMARCD1-209ENST00000550477 TMEM72A0PK05 275 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 AGAP5A6NIR3 686 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 PDLIM1O00151 329 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 HMGN4O00479 90 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 ITM2AO43736 263 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 BCAS1O75363 584 aaPredicted RBP20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 DBIP07108 87 aaKnown RBP20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 NR2F1P10589 423 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 NTF4P34130 210 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 GZMKP49863 264 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 COPZ1P61923 177 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 LSM11P83369 360 aaKnown RBP eCLIP20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 SLC17A1Q14916 467 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 FAM174BQ3ZCQ3 159 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 OTUD3Q5T2D3 398 aaPredicted RBP20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 B3GLCTQ6Y288 498 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 HMGN2P46Q86SG4 172 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 RNF130Q86XS8 419 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 PEX5LQ8IYB4 626 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 C10orf105Q8TEF2 133 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 HTRA1Q92743 480 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 TMEM45BQ96B21 275 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 CCDC115Q96NT0 180 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 TAPBPLQ9BX59 468 aa20.22■□□□□ 0.83
SMARCD1-209ENST00000550477 A0A096LNT2 108 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 CCDC154A6NI56 674 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 CLDN24A6NM45 220 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 PHF1O43189 567 aaPredicted RBP20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 CREB1P16220 341 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 SLC1A6P48664 564 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 PDLIM4P50479 330 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 FUT5Q11128 374 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 TSPO2Q5TGU0 170 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 TMEM225Q6GV28 225 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 PKNOX2Q96KN3 472 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 ZBTB18Q99592 522 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 CACYBPQ9HB71 228 aaKnown RBP20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 TMEM45AQ9NWC5 275 aa20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 FBN1P35555 2871 aaKnown RBP20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 YLPM1P49750 1951 aaKnown RBP20.21■□□□□ 0.83
SMARCD1-209ENST00000550477 OR6C65A6NJZ3 312 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 NDUFS8O00217 210 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 LMX1BO60663 402 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 KRT75O95678 551 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 IMPDH2P12268 514 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 CDH2P19022 906 aaPredicted RBP20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 FOXG1P55316 489 aaPredicted RBP20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 SNRPD2P62316 118 aaKnown RBP20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 SYPL1Q16563 259 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 ZNF621Q6ZSS3 439 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 FBXO17Q96EF6 278 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 PIMREGQ9BSJ6 248 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 NUF2Q9BZD4 464 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 ARMC7Q9H6L4 198 aa20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 MOV10Q9HCE1 1003 aaKnown RBP20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 MYOZ1Q9NP98 299 aaPredicted RBP20.2■□□□□ 0.82
SMARCD1-209ENST00000550477 VSTM5A8MXK1 200 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 AP3D1O14617 1153 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 TM9SF1O15321 606 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 VAMP5O95183 116 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 UBE2NP61088 152 aaKnown RBP20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 EPS8Q12929 822 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 CEACAM7Q14002 265 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 OR7A5Q15622 319 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 GPAT4Q86UL3 456 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 ANKFN1Q8N957 763 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 OR52E6Q96RD3 313 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 TMEM109Q9BVC6 243 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 SLC38A1Q9H2H9 487 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 CALML5Q9NZT1 146 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 FBXO9Q9UK97 447 aaPredicted RBP20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 KCNS2Q9ULS6 477 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 MOKQ9UQ07 419 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 STAB1Q9NY15 2570 aa20.19■□□□□ 0.82
SMARCD1-209ENST00000550477 ATP6V1G2-DDX39BF2Z307 99 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms